@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PTH2R_HUMAN: (2016-01-14 )
MAGLGASLHVWGWLMLGSCLLARAQLDSDGTITIEEQIVLVLKAKVQCELNITAQLQEGEGNCFPEWDGLICWPRGTVGKISAVPCPPYIYDFNHKGVAFRHCNPNGTWDFMHSLNKTWANYSDCLRFLQPDISIGKQEFFERLYVMYTVGYSISFGSLAVAILIIGYFRRLHCTRNYIHMHLFVSFMLRATSIFVKDRVVHAHIGVKELESLIMQDDPQNSIEATSVDKSQYIGCKIAVVMFIYFLATNYYWILVEGLYLHNLIFVAFFSDTKYLWGFILIGWGFPAAFVAAWAVARATLADARCWELSAGDIKWIYQAPILAAIGLNFILFLNTVRVLATKIWETNAVGHDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHCELFFNSFQGFFVSIIYCYCNGEVQAEVKKMWSRWNLSVDWKRTPPCGSRRCGSVLTTVTHSTSSQSQVAASTRMVLISGKAAKIASRQPDSHITLPGYVWSNSEQDCLPHSFHEETKEDSGRQGDDILMEKPSRPMESNPDTEGCQGETEDVL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLC_A_6(4K5Y)
CRFR1_HUMAN
[Raw transfer]



PGW_B_12(4K5Y)
CRFR1_HUMAN
[Raw transfer]
1 PsiBlast_PDB 85.6437%-152 - C4 -4L6R - C562_ECOLX (first) -
62 Fugue 82.8417% -93 - C3 -2OCC - COX1_BOVIN -
61 Fugue 68.7719%-105 - C4 -4K5Y - CRFR1_HUMAN (first) -
64 Fugue 67.2716%-112 - C1 -4CVH - ISPD_HUMAN -
21 PsiBlast_CBE 64.1934%-102 - C4 -4K5Y - CRFR1_HUMAN -
63 Fugue 63.5018% -84 - C2 -2Q06 - ? -
50 HHSearch 61.8516%-144 - C4 -2KS9 - NK1R_HUMAN -
39 HHSearch 60.6912%-142 - C4 -2Z73 - OPSD_TODPA -
44 HHSearch 54.4812%-102 - C4 -1U19 - OPSD_BOVIN -
7 PsiBlast_PDB 54.3632% -45 - C5 -4RWF - -
33 HHSearch 53.7320% -41 - C5 -2QKH - GIPR_HUMAN -
23 PsiBlast_CBE 53.7232% -37 - C5 -3N7S - CALRL_HUMAN -
52 HHSearch 53.5613%-131 - C4 -2LNL - CXCR1_HUMAN -
24 PsiBlast_CBE 52.8032% -37 - C5 -3N7R - CALRL_HUMAN -
4 PsiBlast_PDB 52.6132% -37 - C5 -3N7S - CALRL_HUMAN -
3 PsiBlast_PDB 52.0732% -40 - C5 -3N7R - CALRL_HUMAN -
19 PsiBlast_PDB 51.3627% -20 - C5 -2X57 - VIPR2_HUMAN -
36 HHSearch 50.7923% -64 - C5 -2XDG - GHRHR_HUMAN -
6 PsiBlast_PDB 50.6532% -33 - C5 -3N7P - CALRL_HUMAN -
40 HHSearch 49.4228% -58 - C5 -3N94 - MALE_ECOLI -
2 PsiBlast_PDB 44.9134%-102 - C4 -4K5Y 2.4 CRFR1_HUMAN (first)
22 PsiBlast_CBE 44.8034%-107 - C4 -4K5Y 3.4 CRFR1_HUMAN (first)