@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SSR4_HUMAN: (2016-01-14 )
MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAGMVAIQCIYALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAALRHWPFGSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLPIAIFADTRPARGGQAVACNLQWPHPAWSAVFVVYTFLLGFLLPVLAIGLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLFVTSLDATVNHVSLILSYANSCANPILYGFLSDNFRRFFQRVLCLRCCLLEGAGGAEEEPLDYYATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLC_B_7(4EA3)
C562_ECOLX
[Raw transfer]



OLA_A_7(4N6H)
C562_ECOLX
[Raw transfer]



OLB_A_4(4EA3)
C562_ECOLX
[Raw transfer]



SOG_C_18(2VT4)
ADRB1_MELGA
[Raw transfer]



SOG_D_24(2VT4)
ADRB1_MELGA
[Raw transfer]
2 PsiBlast_PDB 91.7446%-164 - C6 -4RWA - C562_ECOLX (first) -
1 PsiBlast_PDB 91.4144%-155 - C6 -4N6H 2.3 C562_ECOLX (first)
21 PsiBlast_CBE 90.4146%-158 - C6 -4RWD - C562_ECOLX (first) -
22 PsiBlast_CBE 90.2546%-159 - C6 -4RWA - C562_ECOLX (first) -
3 PsiBlast_PDB 90.0046%-158 - C6 -4RWD - C562_ECOLX (first) -
23 PsiBlast_CBE 87.2944%-164 - C6 -4EA3 3.3 C562_ECOLX (first)
4 PsiBlast_PDB 84.8540%-166 - C6 -5C1M - ? -
5 PsiBlast_PDB 84.8144%-162 - C6 -4EA3 3.6 C562_ECOLX (first)
74 HHSearch 83.4930%-145 - C6 -3ODU - CXCR4_HUMAN (first) -
80 HHSearch 81.7226%-146 - C6 -3RZE - ENLYS_BPT4 (first) -
77 HHSearch 81.3826%-147 - C6 -3UON - ACM2_HUMAN (first) -
99 Fugue 81.1828%-144 - C6 -4XNV - P2RY1_HUMAN (first) -
85 HHSearch 80.3827%-148 - C6 -3PBL - DRD3_HUMAN (first) -
102 Fugue 80.2026%-124 - C3 -3ODU - CXCR4_HUMAN (first) -
9 PsiBlast_PDB 79.0027%-162 - C6 -4MBS - CCR5_HUMAN (first) -
78 HHSearch 78.8327%-144 - C6 -2RH1 - ADRB2_HUMAN (first) -
55 PsiBlast_CBE 75.6331%-157 - C6 -2VT4 - ADRB1_MELGA -
57 PsiBlast_CBE 75.5031%-157 - C6 -4BVN - ADRB1_MELGA -
19 PsiBlast_PDB 75.2427%-149 - C6 -4QKX - ADRB2_HUMAN -
53 PsiBlast_CBE 74.9631%-158 - C6 -2VT4 3.3 ADRB1_MELGA
54 PsiBlast_CBE 70.8131%-156 - C6 -2VT4 3.5 ADRB1_MELGA