@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MAPK5_HUMAN: (2013-07-23 )
MSEESDMDKAIKETSILEEYSINWTQKLGAGISGPVRVCVKKSTQERFALKILLDRPKARNEVRLHMMCATHPNIVQIIEVFANSVQFPHESSPRARLLIVMEMMEGGELFHRISQHRHFTEKQASQVTKQIALALRHCHLLNIAHRDLKPENLLFKDNSLDAPVKLCDFGFAKIDQGDLMTPQFTPYYVAPQVLEAQRRHQKEKSGIIPTSPTPYTYNKSCDLWSLGVIIYVMLCGYPPFYSKHHSRTIPKDMRRKIMTGSFEFPEEEWSQISEMAKDVVRKLLKVKPEERLTIEGVLDHPWLNSTEALDNVLPSAQLMMDKAVVAGIQQAHAEQLANMRIQDLKVSLKPLHSVNNPILRKRKLLGTKPKDSVYIHDHENGAEDSNVALEKLRDVIAQCILPQAGKGENEDEKLNEVMQEAWKYNRECKLLRDTLQSFSWNGRGFTDKVDRLKLAEIVKQVIEEQTTSHESQ

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P4O_A_2(3FHR)
MAPK3_HUMAN
[Raw transfer]




P4O_A_4(3R2Y)
MAPK2_HUMAN
[Raw transfer]




L8I_A_2(3M2W)
MAPK2_HUMAN
[Raw transfer]




I85_A_2(3SHE)
MAPK3_HUMAN
[Raw transfer]




HGF_A_3(3M42)
MAPK2_HUMAN
[Raw transfer]




B18_A_5(2PZY)
MAPK2_HUMAN
[Raw transfer]




05B_A_2(3R1N)
MAPK3_HUMAN
[Raw transfer]




F10_A_2(3FXW)
MAPK3_HUMAN
[Raw transfer]




LX9_A_3(3KGA)
MAPK2_HUMAN
[Raw transfer]




B98_X_2(3FYK)
MAPK2_HUMAN
[Raw transfer]




GOL_A_9(3HZT)
?
[Raw transfer]




38R_A_2(3ZDU)
CDKL3_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




STU_C_7(2PZY)
MAPK2_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




B97_X_2(3FYJ)
MAPK2_HUMAN
[Raw transfer]




B18_B_6(2PZY)
MAPK2_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




ADP_B_2(1NY3)
MAPK2_HUMAN
[Raw transfer]




ANP_A_3(3KN5)
KS6A5_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




F10_X_2(2P3G)
MAPK2_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




ANP_B_4(3KN5)

[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




J60_A_7(3HZT)
?
[Raw transfer]




YIQ_A_2(2YIQ)
CHK2_HUMAN
[Raw transfer]




NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]




MK3_A_2(3KA0)
MAPK2_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_6(2WEL)
KCC2D_HUMAN
[Raw transfer]




16 PsiBlast_PDB 79.8243%-107 - C2 -3KA0 6.2 MAPK2_HUMAN
57 PsiBlast_CBE 79.5943%-106 - C2 -2PZY 7.2 MAPK2_HUMAN
129 HHSearch 77.8546%-101 - C2 -1NXK 7.7 MAPK2_HUMAN
9 PsiBlast_PDB 77.2043%-112 - C2 -3R2Y 7.8 MAPK2_HUMAN
19 PsiBlast_PDB 77.1842%-103 - C2 -3R1N 8.1 MAPK3_HUMAN
21 PsiBlast_CBE 77.1542%-113 - C2 -1NY3 4.9 MAPK2_HUMAN
17 PsiBlast_PDB 76.6342%-105 - C2 -3FHR 8.5 MAPK3_HUMAN
58 PsiBlast_CBE 76.5043%-109 - C2 -2PZY 6.9 MAPK2_HUMAN
6 PsiBlast_PDB 75.9243%-103 - C2 -3FYK 4.5 MAPK2_HUMAN
20 PsiBlast_PDB 75.2142%-105 - C2 -3SHE 7.7 MAPK3_HUMAN
10 PsiBlast_PDB 74.6643%-106 - C2 -2PZY 6.2 MAPK2_HUMAN
5 PsiBlast_PDB 74.0843%-101 - C2 -3FYJ 5.0 MAPK2_HUMAN
4 PsiBlast_PDB 74.0443%-107 - C2 -2P3G 6.0 MAPK2_HUMAN
18 PsiBlast_PDB 73.0542%-106 - C2 -3FXW 8.0 MAPK3_HUMAN
69 PsiBlast_CBE 70.7740% -98 - C2 -3M42 7.6 MAPK2_HUMAN
70 PsiBlast_CBE 70.4540% -95 - C2 -3M2W 7.2 MAPK2_HUMAN
71 PsiBlast_CBE 70.0940% -97 - C2 -3KGA 7.9 MAPK2_HUMAN
73 PsiBlast_CBE 68.8836%-121 - C2 -3KN5 4.2 KS6A5_HUMAN
72 PsiBlast_CBE 66.2436%-116 - C2 -3KN5 3.9
93 PsiBlast_CBE 66.1934%-115 - C2 -2WEL 5.6 KCC2D_HUMAN
97 PsiBlast_CBE 66.0434%-112 - C2 -2VN9 6.5 KCC2D_HUMAN
104 PsiBlast_CBE 65.9434%-117 - C2 -2YCR 6.7 CHK2_HUMAN
96 PsiBlast_CBE 65.6234%-111 - C2 -2VN9 6.4 KCC2D_HUMAN
109 PsiBlast_CBE 65.3834%-115 - C2 -2YCS 6.7 CHK2_HUMAN
77 PsiBlast_CBE 64.9136%-113 - C2 -2JAM 6.7 KCC1G_HUMAN
84 PsiBlast_CBE 64.8633%-113 - C2 -3IGO - ?
134 HHSearch 64.1935%-122 - C2 -4GV1 7.1 AKT1_HUMAN
108 PsiBlast_CBE 63.8234%-114 - C2 -2YIQ 6.9 CHK2_HUMAN
76 PsiBlast_CBE 62.4436%-109 - C2 -2JAM 6.2 KCC1G_HUMAN
101 PsiBlast_CBE 62.4231%-131 - C2 -3LIJ 4.1 ?
99 PsiBlast_CBE 62.3733%-122 - C2 -3HZT 6.5 ?
81 PsiBlast_CBE 57.8935%-111 - C2 -2W4O 5.5 KCC4_HUMAN
86 PsiBlast_CBE 56.7035%-118 - C2 -4FG8 5.7 KCC1A_HUMAN
144 HHSearch 50.4833% -95 - C2 -3ZDU 6.6 CDKL3_HUMAN