@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NEK11_HUMAN: (2015-10-15 )
MLKFQEAAKCVSGSTAISTYPKTLIARRYVLQQKLGSGSFGTVYLVSDKKAKRGEELKVLKEISVGELNPNETVQANLEAQLLSKLDHPAIVKFHASFVEQDNFCIITEYCEGRDLDDKIQEYKQAGKIFPENQIIEWFIQLLLGVDYMHERRILHRDLKSKNVFLKNNLLKIGDFGVSRLLMGSCDLATTLTGTPHYMSPEALKHQGYDTKSDIWSLACILYEMCCMNHAFAGSNFLSIVLKIVEGDTPSLPERYPKELNAIMESMLNKNPSLRPSAIEILKIPYLDEQLQNLMCRYSEMTLEDKNLDCQKEAAHIINAMQKRIHLQTLRALSEVQKMTPRERMRLRKLQAADEKARKLKKIVEEKYEENSKRMQELRSRNFQQLSVDVLHEKTHLKGMEEKEEQPEGRLSCSPQDEDEERWQGREEESDEPTLENLPESQPIPSMDLHELESIVEDATSDLGYHEIPEDPLVAEEYYADAFDSYCEESDEEEEEIALERPEKEIRNEGSQPAYRTNQQDSDIEALARCLENVLGCTSLDTKTITTMAEDMSPGPPIFNSVMARTKMKRMRESAMQKLGTEVFEEVYNYLKRARHQNASEAEIRECLEKVVPQASDCFEVDQLLYFEEQLLITMGKEPTLQNHL

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]




T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]




ADP_B_4(4O27)
STK24_HUMAN
[Raw transfer]




ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]




BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]




ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]




EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]




XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]




ZZK_A_2(2WTD)
CHK2_HUMAN
[Raw transfer]




VGM_A_2(2WTC)
CHK2_HUMAN
[Raw transfer]




WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]




OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]




SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]




VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]




WTI_A_2(2WTI)
CHK2_HUMAN
[Raw transfer]




GW8_A_7(4AOT)
STK10_HUMAN
[Raw transfer]




4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]




GW8_B_10(4AOT)
STK10_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]




430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]




YIR_A_2(2YIR)
CHK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




274_A_10(2J7T)
STK10_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




CK7_B_6(4B9D)
NEK1_HUMAN
[Raw transfer]




GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]




2FR_A_2(3DBC)
?
[Raw transfer]




WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]




Z2M_A_2(4BDJ)
CHK2_HUMAN
[Raw transfer]




H3R_A_2(4BDF)
CHK2_HUMAN
[Raw transfer]




YIQ_A_2(2YIQ)
CHK2_HUMAN
[Raw transfer]




P3J_A_2(4BDG)
CHK2_HUMAN
[Raw transfer]




WTJ_A_2(2WTJ)
CHK2_HUMAN
[Raw transfer]




UPX_A_2(2YCQ)
CHK2_HUMAN
[Raw transfer]




5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]




CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]




CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




RU9_A_3(4A9S)
CHK2_HUMAN
[Raw transfer]




A9U_A_4(4A9U)
CHK2_HUMAN
[Raw transfer]




G6I_B_6(4EQU)
STK10_HUMAN
[Raw transfer]




RU5_A_3(4A9R)
CHK2_HUMAN
[Raw transfer]




VFB_A_4(4BDA)
CHK2_HUMAN
[Raw transfer]




ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]




CWS_A_4(4BDE)
CHK2_HUMAN
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




DB8_A_3(5AJQ)
STK10_HUMAN
[Raw transfer]




HAU_A_2(4BDI)
CHK2_HUMAN
[Raw transfer]




R09_B_4(4USD)
?
[Raw transfer]




R09_A_3(4USE)
?
[Raw transfer]




R09_B_4(4USE)
?
[Raw transfer]




6UI_B_4(4USF)
?
[Raw transfer]




YCF_A_2(2YCF)
CHK2_HUMAN
[Raw transfer]




RQQ_A_2(4BDK)
CHK2_HUMAN
[Raw transfer]




WVI_A_3(4BDH)
CHK2_HUMAN
[Raw transfer]




ODH_A_2(4BDC)
CHK2_HUMAN
[Raw transfer]




4FR_A_2(3DBE)
?
[Raw transfer]




YIT_A_2(2YIT)
CHK2_HUMAN
[Raw transfer]




DBQ_A_4(2CN8)
CHK2_HUMAN
[Raw transfer]




Z0O_A_3(4BDD)
CHK2_HUMAN
[Raw transfer]




XZN_A_2(4BC6)
STK10_HUMAN
[Raw transfer]




KWT_A_2(3D5X)
?
[Raw transfer]




EDO_A_3(4BDE)
CHK2_HUMAN
[Raw transfer]




ODO_A_4(4BDB)
CHK2_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




2 PsiBlast_PDB 80.0038%-112 - C1 -4B9D 4.4 NEK1_HUMAN
116 HHSearch 79.7438%-111 - C1 -2W5A 5.5 NEK2_HUMAN
21 PsiBlast_CBE 79.3738%-112 - C1 -4B9D 4.9 NEK1_HUMAN
117 HHSearch 77.4934%-102 - C1 -4B9D 4.4 NEK1_HUMAN
15 PsiBlast_PDB 74.0537%-108 - C1 -2XKE 5.4 NEK2_HUMAN
5 PsiBlast_PDB 73.9937%-105 - C1 -2W5A 5.2 NEK2_HUMAN
14 PsiBlast_PDB 73.0037%-103 - C1 -2XKF 4.9 NEK2_HUMAN
47 PsiBlast_CBE 72.5532%-116 - C1 -2YIR 4.8 CHK2_HUMAN
23 PsiBlast_CBE 72.5537%-101 - C1 -2W5B 4.2 NEK2_HUMAN
56 PsiBlast_CBE 72.5432%-114 - C1 -4BDF 5.0 CHK2_HUMAN
13 PsiBlast_PDB 72.5137%-105 - C1 -2XKD 6.6 NEK2_HUMAN
72 PsiBlast_CBE 72.0232%-106 - C1 -2CN5 5.6 CHK2_HUMAN
50 PsiBlast_CBE 71.9532%-116 - C1 -2YCQ 5.0 CHK2_HUMAN
48 PsiBlast_CBE 71.6832%-115 - C1 -2YIQ 4.4 CHK2_HUMAN
18 PsiBlast_PDB 71.3437% -98 - C1 -2XNO 6.2 NEK2_HUMAN
53 PsiBlast_CBE 71.3232%-108 - C1 -4BDI 3.9 CHK2_HUMAN
73 PsiBlast_CBE 71.1232%-110 - C1 -2YCF 3.5 CHK2_HUMAN
46 PsiBlast_CBE 70.8632%-116 - C1 -2YIT 4.8 CHK2_HUMAN
6 PsiBlast_PDB 70.4037%-101 - C1 -2WQO 6.2 NEK2_HUMAN
20 PsiBlast_PDB 70.2337%-103 - C1 -2JAV 5.5 NEK2_HUMAN
10 PsiBlast_PDB 70.2137%-103 - C1 -2XK7 4.6 NEK2_HUMAN
76 PsiBlast_CBE 70.1734% -98 - C1 -3MA6 4.6 ?
11 PsiBlast_PDB 69.9837%-105 - C1 -2XK8 6.6 NEK2_HUMAN
59 PsiBlast_CBE 69.8932%-113 - C1 -4BDC 3.6 CHK2_HUMAN
49 PsiBlast_CBE 69.6732%-115 - C1 -2YCS 4.5 CHK2_HUMAN
9 PsiBlast_PDB 69.4837%-104 - C1 -2XK6 5.6 NEK2_HUMAN
51 PsiBlast_CBE 69.3832%-109 - C1 -4BDK 3.3 CHK2_HUMAN
16 PsiBlast_PDB 69.1837%-102 - C1 -2XNM 7.9 NEK2_HUMAN
45 PsiBlast_CBE 69.0832%-116 - C1 -2YCR 5.6 CHK2_HUMAN
52 PsiBlast_CBE 68.9332%-117 - C1 -4BDJ 4.4 CHK2_HUMAN
57 PsiBlast_CBE 68.7932%-114 - C1 -4BDE 5.4 CHK2_HUMAN
55 PsiBlast_CBE 68.7232%-116 - C1 -4BDG 4.4 CHK2_HUMAN
60 PsiBlast_CBE 68.3432%-114 - C1 -4BDB 3.7 CHK2_HUMAN
58 PsiBlast_CBE 68.3332%-119 - C1 -4BDD 2.9 CHK2_HUMAN
66 PsiBlast_CBE 68.3232%-109 - C1 -2XM9 6.2 CHK2_HUMAN
19 PsiBlast_PDB 68.2837%-100 - C1 -2XNP 4.9 NEK2_HUMAN
69 PsiBlast_CBE 67.9432%-111 - C1 -2WTD 7.0 CHK2_HUMAN
70 PsiBlast_CBE 67.4132%-109 - C1 -2WTC 5.2 CHK2_HUMAN
63 PsiBlast_CBE 67.2432%-106 - C1 -4A9T 1.5 CHK2_HUMAN
67 PsiBlast_CBE 67.1732%-111 - C1 -2WTJ 2.7 CHK2_HUMAN
75 PsiBlast_CBE 67.1134% -93 - C1 -3MA6 5.4 ?
54 PsiBlast_CBE 66.9832%-116 - C1 -4BDH 4.0 CHK2_HUMAN
68 PsiBlast_CBE 66.8932%-107 - C1 -2WTI 6.2 CHK2_HUMAN
62 PsiBlast_CBE 66.5632%-107 - C1 -4A9U 1.6 CHK2_HUMAN
61 PsiBlast_CBE 66.4332%-115 * C1 *4BDA 4.8 CHK2_HUMAN
12 PsiBlast_PDB 66.3237% -99 - C1 -2XKC 5.2 NEK2_HUMAN
17 PsiBlast_PDB 65.9637% -95 - C1 -2XNN 6.4 NEK2_HUMAN
7 PsiBlast_PDB 65.8137% -99 - C1 -2XK3 5.3 NEK2_HUMAN
4 PsiBlast_PDB 65.7834%-103 - C1 -2WQN 4.6 NEK7_HUMAN
64 PsiBlast_CBE 65.6732%-111 - C1 -4A9S 3.6 CHK2_HUMAN
65 PsiBlast_CBE 64.7832%-108 - C1 -4A9R 4.0 CHK2_HUMAN
8 PsiBlast_PDB 64.4837% -97 - C1 -2XK4 5.5 NEK2_HUMAN
105 PsiBlast_CBE 64.1431% -81 - C1 -4USF 6.4 ?
71 PsiBlast_CBE 63.8732%-114 - C1 -2CN8 2.7 CHK2_HUMAN
42 PsiBlast_CBE 61.4331% -88 - C1 -3DBE 2.6 ?
44 PsiBlast_CBE 60.9531% -86 - C1 -3D5X 3.4 ?
121 HHSearch 59.9932%-100 - C1 -2J7T 7.2 STK10_HUMAN
39 PsiBlast_CBE 58.2631% -89 - C1 -3DBC 7.1 ?
36 PsiBlast_CBE 58.1831% -77 - C1 -5AJQ 6.0 STK10_HUMAN
33 PsiBlast_CBE 56.7031% -68 - C1 -4AOT 8.8 STK10_HUMAN
135 HHSearch 56.4430% -90 - C1 -2A19 4.9 E2AK2_HUMAN
74 PsiBlast_CBE 55.9831% -75 - C1 -4O27 5.6 STK24_HUMAN
34 PsiBlast_CBE 53.5931% -69 - C1 -4AOT 8.9 STK10_HUMAN
32 PsiBlast_CBE 52.2531% -80 - C1 -4EQU 9.7 STK10_HUMAN
31 PsiBlast_CBE 50.9131% -76 - C1 -4USD 6.7 ?
37 PsiBlast_CBE 50.7831% -77 - C1 -4BC6 5.9 STK10_HUMAN
29 PsiBlast_CBE 48.5331% -74 - C1 -4USE 6.4 ?
30 PsiBlast_CBE 48.1131% -71 - C1 -4USE 7.7 ?