@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK2_HUMAN: (2015-10-16 )
MRWVWALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVESHESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ANP_A_2(4E02)
BCKD_RAT
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




ATP_A_4(3SL2)

[Raw transfer]




ADP_A_2(4H85)
BCKD_RAT
[Raw transfer]




ADP_A_2(4DZY)
BCKD_RAT
[Raw transfer]




ADP_A_2(4E00)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ4)
BCKD_RAT
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_A_2(3TZ5)
BCKD_RAT
[Raw transfer]




SAP_A_9(1GJV)
BCKD_RAT
[Raw transfer]




ACP_A_6(1I58)
CHEA_THEMA
[Raw transfer]




ADP_A_2(4H81)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H7Q)
BCKD_RAT
[Raw transfer]




ADP_A_2(3VAD)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




TLA_A_3(4MP2)
PDK2_HUMAN
[Raw transfer]




21 PsiBlast_CBE 95.1597%-118 - C2 -3CRL 5.5 PDK2_RAT
6 PsiBlast_PDB 94.5997%-116 - C2 -3CRL 5.5 PDK2_RAT
3 PsiBlast_PDB 94.18100%-113 - C2 -4MP2 3.9 PDK2_HUMAN
23 PsiBlast_CBE 93.3897%-123 - C2 -1JM6 6.8 PDK2_RAT
4 PsiBlast_PDB 92.7197%-125 - C2 -1JM6 6.4 PDK2_RAT
48 Fugue 91.9796%-122 - C2 -1JM6 5.3 PDK2_RAT
1 PsiBlast_PDB 91.1999%-116 - C2 -4V26 7.2 PDK2_HUMAN
2 PsiBlast_PDB 91.0099%-117 - C2 -4V25 6.3 PDK2_HUMAN
28 PsiBlast_CBE 86.4366%-114 - C2 -2ZKJ 8.1 PDK4_HUMAN
14 PsiBlast_PDB 86.3866%-108 - C2 -1Y8P 8.1 PDK3_HUMAN
27 PsiBlast_CBE 86.2066%-111 - C2 -3D2R 7.9 PDK4_HUMAN
15 PsiBlast_PDB 85.2566%-111 - C2 -2Q8I 5.8 PDK3_HUMAN
31 PsiBlast_CBE 85.1566%-109 - C2 -2E0A 8.4 PDK4_HUMAN
18 PsiBlast_PDB 85.0866%-117 - C2 -3D2R 7.7 PDK4_HUMAN
17 PsiBlast_PDB 84.8166%-113 - C2 -2ZKJ 7.6 PDK4_HUMAN
29 PsiBlast_CBE 84.5766%-109 - C2 -2ZDY 7.0 PDK4_HUMAN
19 PsiBlast_PDB 84.3366%-109 - C2 -2E0A 9.0 PDK4_HUMAN
61 HHSearch 84.2966%-109 - C2 -2E0A 9.0 PDK4_HUMAN
20 PsiBlast_PDB 83.3466%-117 - C2 -2ZDX 4.4 PDK4_HUMAN
30 PsiBlast_CBE 83.2566%-112 - C2 -2ZDX 4.9 PDK4_HUMAN
62 HHSearch 67.3231%-107 - C2 -4E01 6.6 BCKD_RAT
40 PsiBlast_CBE 65.3332%-108 - C2 -3TZ4 5.5 BCKD_RAT
35 PsiBlast_CBE 65.2432%-108 - C2 -4E02 6.6 BCKD_RAT
49 Fugue 65.1931% -99 - C2 -1GKZ 4.4 BCKD_RAT
43 PsiBlast_CBE 65.0932%-104 - C2 -1GKZ 4.5 BCKD_RAT
37 PsiBlast_CBE 64.8832%-113 - C2 -4E00 5.5 BCKD_RAT
36 PsiBlast_CBE 64.8532%-109 - C2 -4E01 6.7 BCKD_RAT
32 PsiBlast_CBE 64.7632%-109 - C2 -4H85 5.9 BCKD_RAT
34 PsiBlast_CBE 64.7532%-107 - C2 -4H7Q 5.4 BCKD_RAT
45 PsiBlast_CBE 64.6532%-103 - C2 -1GJV 5.2 BCKD_RAT
33 PsiBlast_CBE 64.4132%-110 - C2 -4H81 6.0 BCKD_RAT
38 PsiBlast_CBE 64.2732%-109 - C2 -4DZY 6.2 BCKD_RAT
39 PsiBlast_CBE 63.7832%-106 - C2 -3TZ5 6.4 BCKD_RAT
46 PsiBlast_CBE 63.6632%-108 - C2 -3VAD 5.9 BCKD_RAT