@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK4_HUMAN: (2015-10-16 )
MKAARFVLRSAGSLNGAGLVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQLVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVEHQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLPVFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVAM

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]




ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]




ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]




ATP_A_4(3SL2)

[Raw transfer]




ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]




ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]




ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ACP_A_6(1I58)
CHEA_THEMA
[Raw transfer]




P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]




P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]




PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]




RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]




TLA_A_3(4MP2)
PDK2_HUMAN
[Raw transfer]




23 PsiBlast_CBE 94.82100%-121 - C2 -3D2R 7.9 PDK4_HUMAN
24 PsiBlast_CBE 93.31100%-122 - C2 -2ZKJ 8.1 PDK4_HUMAN
2 PsiBlast_PDB 92.9499%-125 - C2 -2ZDX 4.4 PDK4_HUMAN
4 PsiBlast_PDB 92.56100%-125 - C2 -2ZKJ 7.6 PDK4_HUMAN
45 HHSearch 92.38100%-120 - C2 -2E0A 9.0 PDK4_HUMAN
1 PsiBlast_PDB 92.1799%-120 - C2 -2E0A 9.0 PDK4_HUMAN
3 PsiBlast_PDB 91.8599%-117 - C2 -2ZDY 7.0 PDK4_HUMAN
5 PsiBlast_PDB 91.63100%-125 - C2 -3D2R 7.7 PDK4_HUMAN
22 PsiBlast_CBE 91.1399%-121 - C2 -2E0A 8.4 PDK4_HUMAN
21 PsiBlast_CBE 90.4799%-121 - C2 -2ZDX 4.9 PDK4_HUMAN
11 PsiBlast_PDB 83.9166%-115 - C2 -4MP2 3.7 PDK2_HUMAN
25 PsiBlast_CBE 83.3965%-117 - C2 -3CRL 5.6 PDK2_RAT
27 PsiBlast_CBE 83.0265%-122 - C2 -1JM6 6.5 PDK2_RAT
9 PsiBlast_PDB 82.9365%-117 - C2 -3CRL 5.6 PDK2_RAT
19 PsiBlast_PDB 82.7562%-115 - C2 -1Y8P 8.1 PDK3_HUMAN
20 PsiBlast_PDB 82.1662%-116 - C2 -2Q8I 5.8 PDK3_HUMAN
32 Fugue 81.1867%-121 - C2 -1JM6 6.4 PDK2_RAT
7 PsiBlast_PDB 81.1465%-124 - C2 -1JM6 6.4 PDK2_RAT
10 PsiBlast_PDB 80.2965%-123 - C2 -4V25 6.5 PDK2_HUMAN
18 PsiBlast_PDB 79.5466%-121 - C2 -4V26 7.5 PDK2_HUMAN
33 Fugue 60.5730%-107 - C2 -1GKZ 4.6 BCKD_RAT