@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : RIOK3_HUMAN: (2015-10-18 )
MDLVGVASPEPGTAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVAVAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKDITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPLLYDE

Atome Classification :

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1ZAO)
RIO2_ARCFU
[Raw transfer]



ANP_B_2(1TQM)
RIO2_ARCFU
[Raw transfer]



ADP_A_9(1ZTH)
RIO1_ARCFU
[Raw transfer]



ADP_A_3(1ZAR)
RIO2_ARCFU
[Raw transfer]



XYA_A_2(1ZTF)
RIO1_ARCFU
[Raw transfer]



TO1_A_3(3RE4)
RIO1_ARCFU
[Raw transfer]



TO1_B_4(3RE4)
RIO1_ARCFU
[Raw transfer]



1L7_A_2(4JIN)
RIO1_ARCFU
[Raw transfer]
25 HHSearch 95.0937%-105 - C2 -1ZTH 5.5 RIO1_ARCFU
1 PsiBlast_PDB 95.0136% -98 - C2 -3RE4 4.9 RIO1_ARCFU
13 PsiBlast_CBE 94.3236%-102 - C2 -3RE4 5.0 RIO1_ARCFU
2 PsiBlast_PDB 94.2036% -89 - C2 -4JIN 4.5 RIO1_ARCFU
3 PsiBlast_PDB 93.9636% -92 - C2 -1ZTF 3.8 RIO1_ARCFU