@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AISCGQVTSALSPCISYARGNGANPPAACCSGVRSLAGAARSTADKQAACKCIKSAAGGLNAGKAAGIPSKCSVSVPYAISSSVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 94.9870%-113 - C6 -1FK5 6.2 NLTP_MAIZE
22 HHSearch 89.5359%-116 - C6 -1T12 - NLTP1_TOBAC -
26 HHSearch 89.3447%-120 - C6 -1BWO 3.5 NLTP1_WHEAT
21 HHSearch 88.6270%-116 - C6 -1AFH - NLTP_MAIZE -
24 HHSearch 85.3949%-121 - C6 -2ALG 2.4 NLTP1_PRUPE
25 HHSearch 82.6142%-129 - C6 -1SIY - NLTP1_VIGRR -
37 HHSearch 55.6332% -95 - C6 -1PSY - 2SS_RICCO -
35 HHSearch 54.5524%-101 - C6 -1SM7 - ? -
3 Fugue 49.4630%-102 - C6 -1L6H - NLTPX_ORYSJ -
34 HHSearch 49.2724% -99 - C6 -1BEA - ITRF_MAIZE -
13 SP3 49.0812% -66 - C6 -1A0P - ? -
33 HHSearch 47.5320%-112 - C6 -1S6D - 2SS8_HELAN -
2 Fugue 47.3021% -74 - C6 -2RKN - DIRL1_ARATH -
12 SP3 46.9721% -70 - C6 -1L6H - NLTPX_ORYSJ -
27 HHSearch 44.3620% -78 - C6 -2RKN - DIRL1_ARATH -
5 Fugue 42.0516% -57 - C6 -1W2Q - CONG_ARAHY -
4 Fugue 40.5422% -49 - C6 -1PSY - 2SS_RICCO -
14 SP3 37.6716% -87 - C6 -1QPO - NADC_MYCTU -
28 HHSearch 37.5433% -72 - C6 -1L6H - NLTPX_ORYSJ -
32 HHSearch 37.0918% -69 * C6 *1B1U - IAAT_ELECO -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 97.50100%-128 - C- -M042 - -
41 94.62100%-126 - C- -M041 - -
43 93.43100%-118 - C- -M043 - -
39 91.01100%-117 - C- -M039 - -