@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-04-29 )
AVSCGQVSSALSPCISYARGNGANPSAACCSGVRSLASSARSTADKQAACKCIKSAAAGLNAGKAAGIPTKCGVSVPYTISSSVDCSKIR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
29 SP3 96.1671%-110 - C4 -1FK5 6.2 NLTP_MAIZE
11 HHSearch 91.4371%-117 - C4 -1AFH - NLTP_MAIZE -
16 HHSearch 89.4549%-116 - C4 -1BWO 3.5 NLTP1_WHEAT
12 HHSearch 89.0158%-113 - C4 -1T12 - NLTP1_TOBAC -
15 HHSearch 83.4842%-125 - C4 -1SIY - NLTP1_VIGRR -
14 HHSearch 83.2449%-114 - C4 -2ALG 2.4 NLTP1_PRUPE
25 HHSearch 59.7721%-109 - C4 -1SM7 - ? -
24 HHSearch 57.6421%-126 * C4 *1BEA - ITRF_MAIZE -
27 HHSearch 56.2030%-103 - C4 -1PSY - 2SS_RICCO -
21 HHSearch 51.9720%-111 - C4 -1S6D - 2SS8_HELAN -
3 Fugue 51.4528% -89 - C4 -1L6H - NLTPX_ORYSJ -
2 Fugue 50.3424% -72 - C4 -2RKN - DIRL1_ARATH -
17 HHSearch 47.2623% -82 - C4 -2RKN - DIRL1_ARATH -
23 HHSearch 46.1716% -95 - C4 -1B1U - IAAT_ELECO -
9 Fugue 45.2517% -36 - C4 -1S6D - 2SS8_HELAN -
5 Fugue 44.7022% -43 - C4 -1PSY - 2SS_RICCO -
26 HHSearch 41.9617% -85 - C4 -3OB4 - ? -
4 Fugue 39.8314% -38 - C4 -1W2Q - CONG_ARAHY -
18 HHSearch 38.0533% -74 - C4 -1L6H - NLTPX_ORYSJ -
19 HHSearch 36.6733% -50 - C4 -1N89 - NLT2G_WHEAT -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
33 96.44100%-113 - C- -M033 - -
38 94.59100%-112 - C- -M038 - -
34 93.04100%-112 - C- -M034 - -
37 90.12100%-116 - C- -M037 - -