@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 113_tII_WHEAT: (2014-05-01 )
ASCNAGQLTVCASAMLSGAAPSAACCSNLKAQQGCLCQFAKNPAYARYVNSPNARKTVASCGVALPRC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]
2 HHSearch 95.0774%-125 - C3 -1L6H - NLTPX_ORYSJ -
28 SP3 94.7973%-125 - C3 -1L6H - NLTPX_ORYSJ -
18 Fugue 94.7973%-125 - C3 -1L6H - NLTPX_ORYSJ -
1 HHSearch 85.4063%-108 - C3 -1N89 5.3 NLT2G_WHEAT
3 HHSearch 72.5328%-100 - C3 -2RKN - DIRL1_ARATH -
19 Fugue 69.7227% -97 - C3 -2RKN - DIRL1_ARATH -
8 HHSearch 66.3037% -83 - C3 -1AFH - NLTP_MAIZE -
5 HHSearch 65.0930% -73 - C3 -1SIY - NLTP1_VIGRR -
20 Fugue 64.7928% -82 - C3 -1BWO - NLTP1_WHEAT -
6 HHSearch 64.4834% -74 - C3 -2ALG - NLTP1_PRUPE -
4 HHSearch 64.3933% -69 - C3 -1BWO - NLTP1_WHEAT -
37 SP3 63.6823%-139 - C3 -1S6D - 2SS8_HELAN -
9 HHSearch 60.7432% -88 - C3 -1T12 - NLTP1_TOBAC -
29 SP3 59.6232% -73 * C3 *1FK5 - NLTP_MAIZE -
11 HHSearch 55.6823%-110 - C3 -1HYP - HPSE_SOYBN -
31 SP3 51.0117% -83 - C3 -1KNG - CYCY_BRADU -
30 SP3 50.308%-104 - C3 -1U78 - TC3A_CAEEL -
22 Fugue 47.4416% -77 - C3 -2LSE - ? -
36 SP3 46.698%-116 - C3 -1TC3 - TC3A_CAEEL -
32 SP3 44.3814% -92 - C3 -1PS6 - PDXA_ECOLI -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGM_B_2(1N89)
NLT2G_WHEAT
[Raw transfer]
40 94.04100%-131 - C- -M040 - -
43 93.17100%-121 - C- -M043 - -
42 89.43100%-112 - C- -M042 - -