@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
ISCGQVNSALAPCIPFLTKGGAPPPACCSGVRGLLGALRTTADRQAACNCLKAAAGSLRGLNQGNAAALPGRCGVSIPYKISTSTNCATIKF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
13 HHSearch 96.7565%-139 - C2 -1SIY - NLTP1_VIGRR -
12 HHSearch 93.9468%-131 - C2 -2ALG 4.0 NLTP1_PRUPE
31 SP3 91.9463%-125 - C2 -1FK5 5.5 NLTP_MAIZE
14 HHSearch 90.9457%-139 - C2 -1T12 - NLTP1_TOBAC -
15 HHSearch 88.8064%-121 - C2 -1AFH - NLTP_MAIZE -
16 HHSearch 87.0842%-133 - C2 -1BWO - NLTP1_WHEAT -
28 HHSearch 57.9323%-144 * C2 *1HSS - IAA1_WHEAT -
25 HHSearch 56.5222%-138 - C2 -1BEA - ITRF_MAIZE -
36 SP3 54.6717%-141 * C3 *1QPO - NADC_MYCTU -
24 HHSearch 54.2529%-116 - C2 -1SM7 - ? -
30 HHSearch 51.8118%-102 - C2 -1W2Q - CONG_ARAHY -
9 Fugue 51.3224% -86 - C2 -1S6D - 2SS8_HELAN -
17 HHSearch 49.8029% -98 - C2 -2RKN - DIRL1_ARATH -
22 HHSearch 48.1314%-128 - C2 -1B1U - IAAT_ELECO -
29 HHSearch 46.8125% -98 - C2 -2LVF - ? -
5 Fugue 46.6018%-108 - C2 -2D5R - TOB1_HUMAN -
2 Fugue 46.2127% -84 - C2 -2RKN - DIRL1_ARATH -
7 Fugue 45.4619% -62 - C2 -1PSY - 2SS_RICCO -
3 Fugue 44.2730% -83 - C2 -1L6H - NLTPX_ORYSJ -
38 SP3 42.748%-118 - C3 -1O4U - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]
44 98.39100%-143 - C- -M044 - -
46 97.66100%-140 - C- -M046 - -
45 94.20100%-133 - C- -M045 - -
48 92.92100%-136 - C- -M048 - -