@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-03 )
LTCGQVQSRMTPCLPYLTGSGPLGRCCGGVKGLLGAAKTPADRKTVCTCLKSAAGSIGGINVRKAAGLPNMCGVNIPYQISPSTDCTKVQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
10 HHSearch 95.8370%-136 - C3 -1T12 - NLTP1_TOBAC -
13 HHSearch 85.6850%-128 - C3 -1SIY - NLTP1_VIGRR -
12 HHSearch 82.7151%-123 - C3 -1AFH - NLTP_MAIZE -
11 HHSearch 82.6747%-137 - C3 -2ALG 2.8 NLTP1_PRUPE
29 SP3 81.7151%-131 * C3 *1FK5 5.6 NLTP_MAIZE
15 HHSearch 80.3145%-130 - C3 -1BWO 4.2 NLTP1_WHEAT
22 HHSearch 61.3929%-141 - C3 -1SM7 - ? -
23 HHSearch 53.1526%-155 - C3 -1BEA - ITRF_MAIZE -
25 HHSearch 52.8824% -95 - C3 -1PSY - 2SS_RICCO -
16 HHSearch 50.2928%-114 - C3 -2RKN - DIRL1_ARATH -
26 HHSearch 47.5922%-123 - C3 -1S6D - 2SS8_HELAN -
2 Fugue 46.4926% -92 - C3 -2RKN - DIRL1_ARATH -
24 HHSearch 46.4625%-104 - C3 -3OB4 - ? -
20 HHSearch 45.9617%-138 - C3 -1B1U - IAAT_ELECO -
3 Fugue 43.3422%-110 - C3 -1L6H - NLTPX_ORYSJ -
17 HHSearch 40.0922% -77 - C3 -1L6H - NLTPX_ORYSJ -
18 HHSearch 38.4223% -73 - C3 -1N89 - NLT2G_WHEAT -
19 HHSearch 37.4033% -88 - C3 -1PNB - ? -
6 Fugue 36.9714% -71 - C3 -1W2Q - CONG_ARAHY -
5 Fugue 33.4022% -90 - C3 -1X2I - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
37 95.18100%-131 - C- -M037 - -
39 94.80100%-137 - C- -M039 - -
33 94.73100%-136 - C- -M033 - -
38 89.90100%-143 - C- -M038 - -