@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
TVTCGQVTGSLAPCINYLRGNGAGAVPQGCCSGIKSLNSAAQTTPDRQAACKCIKSAAAGIPGINYGIASGLPGKCGVNIPYKISPSTDCSRVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
22 HHSearch 93.9264%-121 - C1 -1T12 - NLTP1_TOBAC -
26 HHSearch 92.5554%-126 - C1 -1SIY - NLTP1_VIGRR -
23 HHSearch 92.4663%-120 - C1 -2ALG 4.0 NLTP1_PRUPE
11 SP3 92.2058%-123 - C1 -1FK5 5.3 NLTP_MAIZE
21 HHSearch 88.1960%-116 - C1 -1AFH - NLTP_MAIZE -
25 HHSearch 84.2044%-129 - C1 -1BWO - NLTP1_WHEAT -
34 HHSearch 64.0529%-134 - C1 -1SM7 - ? -
35 HHSearch 61.0218%-133 - C1 -1BEA - ITRF_MAIZE -
40 HHSearch 56.9019%-143 - C1 -1HSS - IAA1_WHEAT -
31 HHSearch 55.7125%-118 - C1 -1S6D - 2SS8_HELAN -
37 HHSearch 55.3028% -90 - C1 -1PSY - 2SS_RICCO -
27 HHSearch 54.1025%-102 - C1 -2RKN - DIRL1_ARATH -
6 Fugue 54.0825%-104 - C1 -1S6D - 2SS8_HELAN -
8 Fugue 53.3620%-115 - C1 -1HSS - IAA1_WHEAT -
33 HHSearch 52.9815%-118 - C1 -1B1U - IAAT_ELECO -
2 Fugue 52.9625% -98 - C1 -2RKN - DIRL1_ARATH -
7 Fugue 48.6322% -66 - C1 -1PSY - 2SS_RICCO -
9 Fugue 45.9520%-103 - C1 -1L6H - NLTPX_ORYSJ -
38 HHSearch 44.5416% -86 - C1 -1W2Q - CONG_ARAHY -
16 SP3 42.1013% -97 - C1 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
42 98.06100%-135 - C- -M042 - -
47 94.15100%-123 - C- -M047 - -
41 90.77100%-117 - C- -M041 - -