@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-05 )
ITCGQVSSNLVPCFDYVRSDGPVPPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 HHSearch 93.9977%-120 - C3 -2ALG 3.6 NLTP1_PRUPE
14 HHSearch 87.6857%-114 - C3 -1T12 - NLTP1_TOBAC -
13 HHSearch 84.4957%-116 - C3 -1SIY - NLTP1_VIGRR -
31 SP3 83.0456%-114 - C3 -1FK5 5.3 NLTP_MAIZE
16 HHSearch 77.5443%-120 - C3 -1BWO 5.5 NLTP1_WHEAT
12 HHSearch 77.0056% -94 - C3 -1AFH - NLTP_MAIZE -
38 SP3 61.1818%-114 - C3 -1QPO - NADC_MYCTU -
23 HHSearch 60.3827%-127 - C3 -1BEA - ITRF_MAIZE -
25 HHSearch 59.4129%-122 - C3 -1SM7 - ? -
29 HHSearch 57.0027%-133 * C3 *1HSS - IAA1_WHEAT -
28 HHSearch 52.6621%-100 - C3 -2LVF - ? -
33 SP3 52.5218%-114 - C3 -1QPO - NADC_MYCTU -
17 HHSearch 48.5429% -83 - C3 -2RKN - DIRL1_ARATH -
30 HHSearch 47.5420% -86 - C3 -1W2Q - CONG_ARAHY -
24 HHSearch 46.4822% -77 - C3 -1PSY - 2SS_RICCO -
2 Fugue 45.2528% -66 - C3 -2RKN - DIRL1_ARATH -
22 HHSearch 45.1522% -98 - C3 -1B1U - IAAT_ELECO -
5 Fugue 42.7921% -15 - C3 -1PSY - 2SS_RICCO -
9 Fugue 42.1420% -91 - C3 -1S6D - 2SS8_HELAN -
26 HHSearch 41.1822% -76 - C3 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 94.20100%-133 - C- -M041 - -
48 93.22100%-113 - C- -M048 - -