@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-06 )
ITCGQVVSGLSSCLSYLRSGGAVPPACCNGVRGLNSAAKTTADRQQVCECLKSAAAGINLSNASSLPGKCNVNIPYKISPSTDCKSIK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
20 HHSearch 95.2461%-118 - C3 -2ALG 4.0 NLTP1_PRUPE
22 HHSearch 91.2559%-126 - C3 -1SIY - NLTP1_VIGRR -
11 SP3 88.8756%-122 - C3 -1FK5 5.4 NLTP_MAIZE
23 HHSearch 87.6861%-128 - C3 -1T12 - NLTP1_TOBAC -
21 HHSearch 85.5956%-114 - C3 -1AFH - NLTP_MAIZE -
25 HHSearch 83.2445%-124 - C3 -1BWO 3.4 NLTP1_WHEAT
36 HHSearch 67.8232%-130 - C3 -1SM7 - ? -
39 HHSearch 63.8425%-151 * C3 *1HSS - IAA1_WHEAT -
34 HHSearch 58.9825%-130 - C3 -1BEA - ITRF_MAIZE -
40 HHSearch 53.9228% -85 - C3 -2LVF - ? -
32 HHSearch 53.0920%-113 - C3 -1B1U - IAAT_ELECO -
26 HHSearch 52.2522%-103 - C3 -2RKN - DIRL1_ARATH -
37 HHSearch 50.3322% -96 - C3 -1W2Q - CONG_ARAHY -
2 Fugue 48.2824% -82 - C3 -2RKN - DIRL1_ARATH -
29 HHSearch 48.0624%-119 - C3 -1S6D - 2SS8_HELAN -
8 Fugue 47.1924% -45 - C3 -1S6D - 2SS8_HELAN -
7 Fugue 47.1022% -93 - C3 -1HSS - IAA1_WHEAT -
5 Fugue 45.5527% -47 - C3 -1PSY - 2SS_RICCO -
33 HHSearch 44.1129% -66 - C3 -1PSY - 2SS_RICCO -
35 HHSearch 42.0123% -69 - C3 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
42 96.19100%-130 - C- -M042 - -
45 95.19100%-129 - C- -M045 - -
41 95.14100%-137 - C- -M041 - -
47 90.20100%-131 - C- -M047 - -