@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AITCGQVSSAIAPCLSYARGTGSGPSASCCSGVRNLKSAASTAADRRAACNCLKNAARGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRHRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 89.7784%-103 - C3 -1FK5 6.3 NLTP_MAIZE
22 HHSearch 87.2086%-105 - C3 -1AFH - NLTP_MAIZE -
25 HHSearch 84.8658%-106 - C3 -1BWO 6.7 NLTP1_WHEAT
23 HHSearch 84.2759%-111 - C3 -1T12 - NLTP1_TOBAC -
24 HHSearch 82.7355%-113 - C3 -2ALG 3.6 NLTP1_PRUPE
26 HHSearch 73.1449%-110 - C3 -1SIY - NLTP1_VIGRR -
30 HHSearch 56.9022%-137 - C3 -1BEA - ITRF_MAIZE -
36 HHSearch 52.3423%-112 - C3 -1SM7 - ? -
20 SP3 50.7816%-114 - C3 -1HSS - IAA1_WHEAT -
3 Fugue 48.1527%-104 - C3 -1L6H - NLTPX_ORYSJ -
33 HHSearch 47.1418%-103 - C3 -1B1U - IAAT_ELECO -
2 Fugue 46.5322% -72 - C3 -2RKN - DIRL1_ARATH -
37 HHSearch 45.5226% -82 - C3 -1PSY - 2SS_RICCO -
27 HHSearch 44.5220% -89 - C3 -2RKN - DIRL1_ARATH -
5 Fugue 44.3126% -64 - C3 -1PSY - 2SS_RICCO -
12 SP3 43.0421% -76 - C3 -1L6H - NLTPX_ORYSJ -
34 HHSearch 40.5616% -96 - C3 -1S6D - 2SS8_HELAN -
35 HHSearch 38.7120% -64 - C3 -3OB4 - ? -
10 Fugue 38.4316% -78 - C3 -2KT9 - RRP3_SYNY3 -
28 HHSearch 37.2031% -81 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
40 95.01100%-113 - C- -M040 - -
47 92.40100%-123 - C- -M047 - -