@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-08 )
AITCGQVSSAIAPCLSYARGTGSGPSASCCSGVRNLKSAASTAADRRAACNCLKNAARGLSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 93.2987%-106 - C3 -1FK5 6.2 NLTP_MAIZE
20 HHSearch 87.7287%-110 - C3 -1AFH - NLTP_MAIZE -
25 HHSearch 83.2359%-112 - C3 -1BWO 6.6 NLTP1_WHEAT
21 HHSearch 82.0560%-111 - C3 -1T12 - NLTP1_TOBAC -
23 HHSearch 80.3254%-114 - C3 -2ALG 3.6 NLTP1_PRUPE
24 HHSearch 72.1148%-113 - C3 -1SIY - NLTP1_VIGRR -
32 HHSearch 54.2722%-136 - C3 -1BEA - ITRF_MAIZE -
13 SP3 52.5919%-117 - C3 -1HSS - IAA1_WHEAT -
35 HHSearch 50.2822%-111 - C3 -1SM7 - ? -
3 Fugue 46.6527%-104 - C3 -1L6H - NLTPX_ORYSJ -
2 Fugue 45.9622% -74 - C3 -2RKN - DIRL1_ARATH -
36 HHSearch 44.9527% -83 - C3 -1PSY - 2SS_RICCO -
26 HHSearch 44.7520% -89 - C3 -2RKN - DIRL1_ARATH -
31 HHSearch 43.5817%-100 - C3 -1B1U - IAAT_ELECO -
18 SP3 43.3416%-101 - C3 -1QPO - NADC_MYCTU -
5 Fugue 42.5526% -63 - C3 -1PSY - 2SS_RICCO -
12 SP3 42.1421% -76 - C3 -1L6H - NLTPX_ORYSJ -
33 HHSearch 39.4716%-100 - C3 -1S6D - 2SS8_HELAN -
34 HHSearch 36.8120% -63 - C3 -3OB4 - ? -
27 HHSearch 36.1231% -81 - C3 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]
41 94.37100%-129 - C- -M041 - -
46 93.70100%-116 - C- -M046 - -
39 93.29100%-116 - C- -M039 - -
44 91.34100%-120 - C- -M044 - -
43 90.66100%-112 - C- -M043 - -