@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-12 )
ISCANVAGMLSSCINYLRNGGSLPSNCCAGLKSLNTQARNKGIRQAVCRCLQNAAKTITGLKTNLVEGLPRRCGVKIPYKISTSTNCNRVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
11 SP3 93.9048%-140 - C2 -1FK5 5.7 NLTP_MAIZE
21 HHSearch 91.4046%-138 - C2 -2ALG 3.7 NLTP1_PRUPE
22 HHSearch 90.6948%-139 - C2 -1AFH - NLTP_MAIZE -
24 HHSearch 89.4047%-146 - C2 -1SIY - NLTP1_VIGRR -
23 HHSearch 86.9847%-143 - C2 -1T12 - NLTP1_TOBAC -
26 HHSearch 82.2737%-152 - C2 -1BWO - NLTP1_WHEAT -
37 HHSearch 63.8230%-149 - C2 -1SM7 - ? -
41 HHSearch 61.2420%-188 - C2 -1HSS - IAA1_WHEAT -
33 HHSearch 58.3622%-171 - C2 -1BEA - ITRF_MAIZE -
31 HHSearch 57.4928%-152 - C2 -2LVF - ? -
7 Fugue 53.2821% -99 - C2 -1S6D - 2SS8_HELAN -
27 HHSearch 50.4820%-129 - C2 -2RKN - DIRL1_ARATH -
36 HHSearch 47.8626%-106 - C2 -1PSY - 2SS_RICCO -
38 HHSearch 47.7423%-136 - C2 -1S6D - 2SS8_HELAN -
34 HHSearch 47.0119%-126 - C2 -1B1U - IAAT_ELECO -
4 Fugue 44.9821% -70 - C2 -1PSY - 2SS_RICCO -
35 HHSearch 44.2524%-111 - C2 -3OB4 - ? -
2 Fugue 44.1719% -79 - C2 -2RKN - DIRL1_ARATH -
14 SP3 42.5616%-114 - C2 -1QPO - NADC_MYCTU -
3 Fugue 40.0327%-104 - C2 -1L6H - NLTPX_ORYSJ -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
49 96.18100%-165 - C- -M049 - -
46 95.16100%-165 - C- -M046 - -
48 94.80100%-164 - C- -M048 - -
42 94.01100%-161 - C- -M042 - -