@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-13 )
LTCGQVNSAVGPCIAYVRGTGAGPSGACCSGVRSLNSQARSTADKRTACNCLKTAARGVKGLDVGKASSIPSKCGVNIPYTISPNIDCSRV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
11 SP3 90.9870%-113 - C2 -1FK5 6.0 NLTP_MAIZE
21 HHSearch 87.6870%-113 - C2 -1AFH - NLTP_MAIZE -
23 HHSearch 86.9561%-114 - C2 -1BWO 6.7 NLTP1_WHEAT
25 HHSearch 80.7450%-118 - C2 -2ALG 3.2 NLTP1_PRUPE
22 HHSearch 79.3557%-104 - C2 -1T12 - NLTP1_TOBAC -
26 HHSearch 78.6142%-112 - C2 -1SIY - NLTP1_VIGRR -
34 HHSearch 58.1222%-138 - C2 -1BEA - ITRF_MAIZE -
36 HHSearch 54.0424%-110 - C2 -1SM7 - ? -
37 HHSearch 46.4924% -95 - C2 -1PSY - 2SS_RICCO -
2 Fugue 45.8327% -77 - C2 -2RKN - DIRL1_ARATH -
19 SP3 44.1619% -92 - C2 -1QPO - NADC_MYCTU -
14 SP3 44.1619% -92 - C2 -1QPO - NADC_MYCTU -
33 HHSearch 43.9218%-102 - C2 -1B1U - IAAT_ELECO -
6 Fugue 43.9024% -73 - C2 -1PSY - 2SS_RICCO -
27 HHSearch 43.7024% -89 - C2 -2RKN - DIRL1_ARATH -
5 Fugue 43.1026% -93 - C2 -1L6H - NLTPX_ORYSJ -
13 SP3 40.1119% -61 - C2 -1L6H - NLTPX_ORYSJ -
8 Fugue 39.0316% -72 - C2 -1S6D - 2SS8_HELAN -
31 HHSearch 38.7615% -93 - C2 -1S6D - 2SS8_HELAN -
17 SP3 37.8112% -65 - C2 -1A0P - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]



LPC_A_4(1BWO)
NLTP1_WHEAT
[Raw transfer]



LPC_A_3(1BWO)
NLTP1_WHEAT
[Raw transfer]
45 94.45100%-123 - C- -M045 - -
39 93.76100%-126 - C- -M039 - -
43 93.24100%-116 - C- -M043 - -
44 92.52100%-127 - C- -M044 - -