@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : H_NR3B1_ERRa: (2016-04-07 )
MSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

047_B_4(2PJL)
ERR1_HUMAN
[Raw transfer]




OHT_A_2(2P7Z)
ERR3_HUMAN
[Raw transfer]




1OH_A_2(2ZAS)
ERR3_HUMAN
[Raw transfer]




TXF_D_9(2EWP)
ERR3_HUMAN
[Raw transfer]




OHT_A_2(2GPU)

[Raw transfer]




047_A_3(2PJL)
ERR1_HUMAN
[Raw transfer]




OHT_D_4(1VJB)
ERR3_HUMAN
[Raw transfer]




TXF_C_8(2EWP)
ERR3_HUMAN
[Raw transfer]




TXF_A_6(2EWP)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




TXF_E_10(2EWP)

[Raw transfer]




OHT_C_3(1VJB)
ERR3_HUMAN
[Raw transfer]




2OH_A_2(2E2R)
ERR3_HUMAN
[Raw transfer]




2OH_A_3(2P7G)
ERR3_HUMAN
[Raw transfer]




BPZ_A_2(2ZKC)
ERR3_HUMAN
[Raw transfer]




TXF_B_7(2EWP)
ERR3_HUMAN
[Raw transfer]




DES_H_8(1S9P)

[Raw transfer]




43M_A_2(2P7A)
ERR3_HUMAN
[Raw transfer]




1BA_A_5(2GPP)
ERR3_HUMAN
[Raw transfer]




DES_E_5(1S9P)
ERR3_MOUSE
[Raw transfer]




DES_F_6(1S9P)
ERR3_MOUSE
[Raw transfer]




FMT_A_4(2YAT)

[Raw transfer]




DES_G_7(1S9P)
ERR3_MOUSE
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




5FB_A_2(3K6P)
ERR1_HUMAN
[Raw transfer]




CHD_E_5(1S9Q)
ERR3_MOUSE
[Raw transfer]




2 PsiBlast_PDB 88.28100%-149 - C2 -1XB7 - ERR1_HUMAN -
1 PsiBlast_PDB 87.94100%-145 - C2 -3K6P 6.8 ERR1_HUMAN
21 PsiBlast_CBE 86.9299%-142 - C2 -2PJL 9.3 ERR1_HUMAN
4 PsiBlast_PDB 86.7795%-148 - C2 -3D24 - ERR1_HUMAN -
247 HHSearch 86.16100%-145 - C2 -3K6P 6.8 ERR1_HUMAN
3 PsiBlast_PDB 85.7299%-143 - C2 -2PJL 9.4 ERR1_HUMAN
31 PsiBlast_CBE 81.6362%-130 - C2 -2EWP 7.4 ERR3_HUMAN
32 PsiBlast_CBE 81.0562%-129 - C2 -2EWP 8.8 ERR3_HUMAN
16 PsiBlast_PDB 81.0062%-132 - C2 -2P7A 4.2 ERR3_HUMAN
15 PsiBlast_PDB 80.8762%-133 - C2 -1TFC - ERR3_HUMAN -
20 PsiBlast_PDB 80.6562%-132 - C2 -2ZAS 6.9 ERR3_HUMAN
17 PsiBlast_PDB 80.5062%-130 - C2 -2P7G 6.8 ERR3_HUMAN
33 PsiBlast_CBE 80.3662%-131 - C2 -2EWP 9.1 ERR3_HUMAN
6 PsiBlast_PDB 80.0362%-133 - C2 -2GP7 - ERR3_HUMAN -
12 PsiBlast_PDB 79.9562%-131 - C2 -2EWP 8.1 ERR3_HUMAN
19 PsiBlast_PDB 79.8462%-131 - C2 -2E2R 6.9 ERR3_HUMAN
8 PsiBlast_PDB 79.4262%-128 - C2 -2GPP 7.7 ERR3_HUMAN
249 HHSearch 79.2264%-133 - C2 -2E2R 6.9 ERR3_HUMAN
5 PsiBlast_PDB 79.2262%-135 - C2 -1KV6 - ERR3_HUMAN -
34 PsiBlast_CBE 79.1562%-126 - C2 -1S9P 7.2
39 PsiBlast_CBE 78.6662%-129 - C2 -2ZKC 8.4 ERR3_HUMAN
9 PsiBlast_PDB 78.2462%-132 - C2 -2GPU 7.9
13 PsiBlast_PDB 77.2962%-126 - C2 -1S9Q 3.9 ERR3_MOUSE
36 PsiBlast_CBE 76.9462%-124 - C2 -1S9P 6.8 ERR3_MOUSE
11 PsiBlast_PDB 73.9862%-122 - C2 -1S9P 7.0 ERR3_MOUSE
30 PsiBlast_CBE 73.9162%-135 - C2 -2EWP 7.9
35 PsiBlast_CBE 73.8862%-122 - C2 -1S9P 5.8 ERR3_MOUSE
18 PsiBlast_PDB 73.0262%-124 - C2 -2P7Z 8.0 ERR3_HUMAN
14 PsiBlast_PDB 71.8862%-125 - C2 -1VJB 6.9 ERR3_HUMAN
37 PsiBlast_CBE 71.6262%-119 - C2 -1VJB 7.3 ERR3_HUMAN
57 PsiBlast_CBE 60.9734%-129 - C2 -2YAT 3.1