@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0409: (2015-12-01 )
MTLADKPVLSHAVKKLLTNQYIDYVRVIINRNHEDFYRETIDSLHNYYLSEAVHSFQYVTLKSRKKEEWIPVSSTGMKGRVDTKLLSPVYGGKSRQNSVKLGLESLQKINPDFVVIHDACRPFVSNTLINNLARSMINNQHTGVVPAIEVEDTISLVNDDLIESTIPRERLRAIQTPQIFNFKELLSYHRSNKEFTDDSSLMVEHKKRVVVTRGEKINFKLTTKEDINMAKLLLDEPKYRVGTGYDIHRFIKAQGKAKSFIKICGVEIEYDMKIEAHSDGDVAIHAVVDAILGALGCGDIGAHFPPSFPEWKDRNSSHFLDFAAKKAKEKGYSVSNLDITIVCEEPKISPYKVAMKKFISKTLEIDSEFVNVKATTTEKLGSIGRNEGILAHASVLLYKIAPLHN

Atome Classification :

(86 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUD_D_4(1U43)
ISPF_ECOLI
[Raw transfer]




CDM_A_3(1U40)
ISPF_ECOLI
[Raw transfer]




CTP_B_6(3IEW)
ISPF_BURPS
[Raw transfer]




1AA_C_15(2AMT)
ISPF_ECOLI
[Raw transfer]




AO9_A_9(3Q8H)
ISPF_BURPS
[Raw transfer]




AO9_A_5(3Q8H)
ISPF_BURPS
[Raw transfer]




AO9_B_11(3Q8H)
ISPF_BURPS
[Raw transfer]




C_A_3(1W55)
ISPDF_CAMJE
[Raw transfer]




829_C_10(3KE1)
ISPF_BURP1
[Raw transfer]




829_A_5(3KE1)
ISPF_BURP1
[Raw transfer]




C5P_C_15(1H48)
ISPF_ECOLI
[Raw transfer]




1AA_E_18(2AMT)
ISPF_ECOLI
[Raw transfer]




829_B_8(3KE1)
ISPF_BURP1
[Raw transfer]




CDP_C_15(2UZH)
?
[Raw transfer]




C5P_B_8(3F0G)
ISPF_BURP1
[Raw transfer]




CDP_C_9(3IEW)
ISPF_BURPS
[Raw transfer]




CDP_A_4(1YQN)
ISPF_ECOLI
[Raw transfer]




1AA_D_19(2AMT)
ISPF_ECOLI
[Raw transfer]




1AA_C_14(2AMT)
ISPF_ECOLI
[Raw transfer]




1AA_E_17(2AMT)
ISPF_ECOLI
[Raw transfer]




CTN_C_24(3T80)
ISPF_SALTY
[Raw transfer]




C5P_A_5(2PMP)
ISPF_ARATH
[Raw transfer]




C5P_E_14(3F0G)
ISPF_BURP1
[Raw transfer]




C5P_A_9(1H47)
ISPF_ECOLI
[Raw transfer]




C5P_B_10(1H47)
ISPF_ECOLI
[Raw transfer]




C5P_A_5(2PMP)
ISPF_ARATH
[Raw transfer]




CTN_B_11(3QHD)
ISPF_BURP1
[Raw transfer]




C5P_C_8(3F0F)
ISPF_BURP1
[Raw transfer]




CDP_A_4(1U3L)
ISPF_ECOLI
[Raw transfer]




CTN_B_17(3T80)
ISPF_SALTY
[Raw transfer]




CTN_B_9(3P0Z)
ISPF_BURP1
[Raw transfer]




C5P_D_16(1H47)
ISPF_ECOLI
[Raw transfer]




CTN_B_9(3P10)
ISPF_BURP1
[Raw transfer]




C5P_F_16(3F0G)
ISPF_BURP1
[Raw transfer]




C5P_E_17(1H47)
ISPF_ECOLI
[Raw transfer]




C5P_A_9(1H48)
ISPF_ECOLI
[Raw transfer]




F01_B_7(3ELC)
ISPF_ECOLI
[Raw transfer]




I5A_B_9(3K2X)
ISPF_BURP1
[Raw transfer]




C5P_F_26(1H48)
ISPF_ECOLI
[Raw transfer]




C5P_C_10(3F0G)
ISPF_BURP1
[Raw transfer]




CDP_A_5(3IEW)
ISPF_BURPS
[Raw transfer]




C5P_C_12(1H47)
ISPF_ECOLI
[Raw transfer]




GOL_C_9(3GHZ)
ISPF_SALTY
[Raw transfer]




C5P_C_14(5B8F)
ISPF_PSEAE
[Raw transfer]




1AA_A_13(2AMT)
ISPF_ECOLI
[Raw transfer]




C_B_8(3IEQ)
ISPF_BURP1
[Raw transfer]




GOL_A_4(3GHZ)
ISPF_SALTY
[Raw transfer]




C5P_A_5(5B8F)
ISPF_PSEAE
[Raw transfer]




CTN_C_13(3QHD)
ISPF_BURP1
[Raw transfer]




I5A_A_5(3K2X)
ISPF_BURP1
[Raw transfer]




CTN_C_12(3P10)
ISPF_BURP1
[Raw transfer]




CTN_A_6(3QHD)
ISPF_BURP1
[Raw transfer]




CTN_C_12(3P0Z)
ISPF_BURP1
[Raw transfer]




C5P_B_12(1H48)
ISPF_ECOLI
[Raw transfer]




CTN_A_7(3P0Z)
ISPF_BURP1
[Raw transfer]




CTN_A_6(3P10)
ISPF_BURP1
[Raw transfer]




GOL_A_4(3F0F)
ISPF_BURP1
[Raw transfer]




C_A_4(3IEQ)
ISPF_BURP1
[Raw transfer]




C_C_10(3IEQ)
ISPF_BURP1
[Raw transfer]




I5A_C_11(3K2X)
ISPF_BURP1
[Raw transfer]




CAR_A_8(3ERN)
ISPF_ECOLI
[Raw transfer]




CAR_E_16(3ERN)
ISPF_ECOLI
[Raw transfer]




C5P_D_12(3F0G)
ISPF_BURP1
[Raw transfer]




C5P_F_19(1H47)
ISPF_ECOLI
[Raw transfer]




F01_A_5(3ELC)
ISPF_ECOLI
[Raw transfer]




C5P_D_19(1H48)
ISPF_ECOLI
[Raw transfer]




F01_C_9(3ELC)
ISPF_ECOLI
[Raw transfer]




CAR_D_15(3ERN)
ISPF_ECOLI
[Raw transfer]




CTN_A_10(3T80)
ISPF_SALTY
[Raw transfer]




C5P_E_23(1H48)
ISPF_ECOLI
[Raw transfer]




CAR_B_9(3ERN)
ISPF_ECOLI
[Raw transfer]




C5P_B_8(5B8F)
ISPF_PSEAE
[Raw transfer]




535_A_5(3K14)
ISPF_BURP1
[Raw transfer]




CAR_C_13(3ERN)
ISPF_ECOLI
[Raw transfer]




535_C_11(3K14)
ISPF_BURP1
[Raw transfer]




HHV_C_10(3JVH)
ISPF_BURP1
[Raw transfer]




535_B_9(3K14)
ISPF_BURP1
[Raw transfer]




HHV_A_5(3JVH)
ISPF_BURP1
[Raw transfer]




HHV_B_8(3JVH)
ISPF_BURP1
[Raw transfer]




717_A_6(3MBM)
ISPF_BURP1
[Raw transfer]




717_C_11(3MBM)
ISPF_BURP1
[Raw transfer]




717_B_10(3MBM)
ISPF_BURP1
[Raw transfer]




102 HHSearch 89.3836% -95 - C8 -1W55 3.5 ISPDF_CAMJE
1 PsiBlast_PDB 85.0038% -92 - C8 -1W55 - ISPDF_CAMJE -
2 PsiBlast_PDB 84.5638%-100 - C8 -1W57 - ISPDF_CAMJE -
24 PsiBlast_CBE 76.1746%-124 - C8 -5B8F 3.2 ISPF_PSEAE
6 PsiBlast_PDB 75.7746%-125 - C8 -5B8F 3.3 ISPF_PSEAE
97 PsiBlast_CBE 75.4839%-123 - C8 -3F0G 3.1 ISPF_BURP1
23 PsiBlast_CBE 74.9246%-122 - C8 -5B8F 2.9 ISPF_PSEAE
7 PsiBlast_PDB 73.7145%-110 - C8 -1T0A - ISPF_SHEON -
90 PsiBlast_CBE 72.9939%-131 - C8 -3IEQ 3.4 ISPF_BURP1
94 PsiBlast_CBE 72.9139%-121 - C8 -3F0G 3.1 ISPF_BURP1
98 PsiBlast_CBE 72.7739%-121 - C8 -3F0F - ISPF_BURP1 -
105 HHSearch 72.4945%-115 * C8 *1YQN 3.4 ISPF_ECOLI
72 PsiBlast_CBE 72.4339%-131 - C8 -3MBM 2.9 ISPF_BURP1
88 PsiBlast_CBE 72.2939%-124 - C8 -3IEW 4.1 ISPF_BURPS
75 PsiBlast_CBE 72.2839%-126 - C8 -3KE1 3.1 ISPF_BURP1
63 PsiBlast_CBE 72.2439%-125 - C8 -3Q8H 3.5 ISPF_BURPS
70 PsiBlast_CBE 71.8739%-124 - C8 -3P0Z 3.3 ISPF_BURP1
62 PsiBlast_CBE 71.7639%-124 - C8 -3Q8H 3.9 ISPF_BURPS
61 PsiBlast_CBE 71.7639%-125 - C8 -3QHD 3.5 ISPF_BURP1
78 PsiBlast_CBE 71.7239%-127 - C8 -3K2X 3.8 ISPF_BURP1
73 PsiBlast_CBE 71.6839%-123 - C8 -3MBM 3.3 ISPF_BURP1
91 PsiBlast_CBE 71.5839%-124 - C8 -3IEQ 3.5 ISPF_BURP1
96 PsiBlast_CBE 71.5739%-124 - C8 -3F0G 3.0 ISPF_BURP1
85 PsiBlast_CBE 71.5439%-125 - C8 -3JVH 2.1 ISPF_BURP1
82 PsiBlast_CBE 71.4839%-125 - C8 -3K14 3.2 ISPF_BURP1
81 PsiBlast_CBE 71.3739%-130 - C8 -3K14 3.7 ISPF_BURP1
100 PsiBlast_CBE 71.2939%-123 - C8 -3F0F 2.2 ISPF_BURP1
59 PsiBlast_CBE 71.2939%-121 - C8 -3QHD 3.4 ISPF_BURP1
87 PsiBlast_CBE 71.1839%-129 - C8 -3IEW 3.8 ISPF_BURPS
67 PsiBlast_CBE 71.1539%-123 - C8 -3P10 3.3 ISPF_BURP1
60 PsiBlast_CBE 71.1439%-125 - C8 -3QHD 3.5 ISPF_BURP1
99 PsiBlast_CBE 71.1139%-123 - C8 -3F0F 3.2 ISPF_BURP1
89 PsiBlast_CBE 71.1039%-128 - C8 -3IEQ 3.2 ISPF_BURP1
86 PsiBlast_CBE 71.0839%-126 - C8 -3IEW 3.1 ISPF_BURPS
66 PsiBlast_CBE 71.0839%-127 - C8 -3P10 3.5 ISPF_BURP1
104 HHSearch 71.0447%-118 - C8 -2PMP 3.4 ISPF_ARATH
93 PsiBlast_CBE 71.0139%-121 - C8 -3F0G 3.1 ISPF_BURP1
45 PsiBlast_CBE 70.7542% -92 - C8 -3ERN 3.1 ISPF_ECOLI
77 PsiBlast_CBE 70.7439%-126 - C8 -3K2X 3.3 ISPF_BURP1
84 PsiBlast_CBE 70.7339%-125 - C8 -3JVH 3.1 ISPF_BURP1
68 PsiBlast_CBE 70.5939%-126 - C8 -3P0Z 3.2 ISPF_BURP1
92 PsiBlast_CBE 70.4839%-127 - C8 -3F0G 2.7 ISPF_BURP1
76 PsiBlast_CBE 70.4539%-123 - C8 -3KE1 3.2 ISPF_BURP1
69 PsiBlast_CBE 70.4339%-127 - C8 -3P0Z 3.5 ISPF_BURP1
79 PsiBlast_CBE 70.2839%-123 - C8 -3K2X 3.3 ISPF_BURP1
64 PsiBlast_CBE 70.2639%-126 - C8 -3Q8H 3.4 ISPF_BURPS
71 PsiBlast_CBE 70.1339%-118 - C8 -3MBM 3.5 ISPF_BURP1
65 PsiBlast_CBE 70.0839%-123 - C8 -3P10 3.2 ISPF_BURP1
5 PsiBlast_PDB 69.7946%-117 - C8 -2PMP 3.4 ISPF_ARATH
42 PsiBlast_CBE 69.7442% -97 - C8 -3ERN 3.0 ISPF_ECOLI
83 PsiBlast_CBE 69.7039%-119 - C8 -3JVH 3.1 ISPF_BURP1
74 PsiBlast_CBE 69.6739%-124 - C8 -3KE1 2.8 ISPF_BURP1
80 PsiBlast_CBE 68.5239%-122 - C8 -3K14 3.6 ISPF_BURP1
47 PsiBlast_CBE 67.3342% -90 - C8 -3ELC 3.1 ISPF_ECOLI
33 PsiBlast_CBE 67.1742% -91 - C8 -1H48 3.0 ISPF_ECOLI
16 PsiBlast_PDB 66.6642% -87 - C8 -3ERN 2.6 ISPF_ECOLI
11 PsiBlast_PDB 66.4543% -89 - C8 -3T80 3.1 ISPF_SALTY
48 PsiBlast_CBE 66.4042% -92 - C8 -3ELC 3.1 ISPF_ECOLI
38 PsiBlast_CBE 66.3442% -89 - C8 -1H47 3.1 ISPF_ECOLI
37 PsiBlast_CBE 66.2842% -89 - C8 -1H47 3.2 ISPF_ECOLI
46 PsiBlast_CBE 65.9142% -90 - C8 -3ERN 2.6 ISPF_ECOLI
41 PsiBlast_CBE 65.7942% -88 - C8 -1H47 3.1 ISPF_ECOLI
51 PsiBlast_CBE 65.7543% -85 - C8 -2AMT 3.1 ISPF_ECOLI
35 PsiBlast_CBE 65.6442% -84 - C8 -1H48 2.9 ISPF_ECOLI
40 PsiBlast_CBE 65.6042% -90 - C8 -1H47 3.3 ISPF_ECOLI
52 PsiBlast_CBE 65.2143% -86 - C8 -2AMT 4.3 ISPF_ECOLI
36 PsiBlast_CBE 65.0742% -88 - C8 -1H48 2.9 ISPF_ECOLI
13 PsiBlast_PDB 65.0642% -90 - C8 -1H48 3.0 ISPF_ECOLI
30 PsiBlast_CBE 64.9643% -90 - C8 -3GHZ 2.3 ISPF_SALTY
12 PsiBlast_PDB 64.7942% -89 - C8 -1H47 3.3 ISPF_ECOLI
34 PsiBlast_CBE 64.7542% -91 - C8 -1H48 2.6 ISPF_ECOLI
14 PsiBlast_PDB 64.7242% -88 - C8 -3ELC 3.2 ISPF_ECOLI
108 HHSearch 64.6031%-114 - C8 -2UZH 3.4 ?
10 PsiBlast_PDB 64.5343% -91 - C8 -3GHZ 2.3 ISPF_SALTY
29 PsiBlast_CBE 64.3143% -88 - C8 -3T80 3.1 ISPF_SALTY
50 PsiBlast_CBE 64.2743% -92 - C8 -2AMT 4.0 ISPF_ECOLI
58 PsiBlast_CBE 64.1243% -89 - C8 -1U3L 3.9 ISPF_ECOLI
39 PsiBlast_CBE 64.1042% -87 - C8 -1H47 3.2 ISPF_ECOLI
44 PsiBlast_CBE 64.0342% -89 - C8 -3ERN 2.8 ISPF_ECOLI
49 PsiBlast_CBE 64.0143% -88 - C8 -2AMT 3.3 ISPF_ECOLI
53 PsiBlast_CBE 64.0043% -92 - C8 -2AMT 3.6 ISPF_ECOLI
32 PsiBlast_CBE 63.9442% -89 - C8 -1H48 3.3 ISPF_ECOLI
56 PsiBlast_CBE 63.5443% -87 - C8 -1U40 3.2 ISPF_ECOLI
55 PsiBlast_CBE 63.2343% -86 - C8 -1U43 2.9 ISPF_ECOLI
28 PsiBlast_CBE 63.0343% -91 - C8 -3T80 3.2 ISPF_SALTY
54 PsiBlast_CBE 61.2543% -88 - C8 -2AMT 4.0 ISPF_ECOLI