@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0548: (2015-12-02 )
MADLEKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDGVGAAPDEKFSKIKHREPMLSLENAYDEQGVERFLSRIKRFLIEEEIEVFCEPKIDGLSFSAVYEDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQDVQDRLEVRGEIYINNSDFLKLNKDNEFANPRNAAAGSLKQLDVSITANRPLKYFAYSLIGGKEKSQSEVLNRLESLGFCVNEHRSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSRLGSTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLHNQDEIKRKDVREGDIVTIKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQAEGAAIRCSEELTCKAQIIGKLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEERLNEFSLKEQPDWGERSIANLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSYNNWYNSMIKLLSNDAEVGVGGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKMLKDLTDYLQILSVNSNSSNSVLNNKVIVFTGKLLTMSRGEAKVRAKALGAKVSSNLSAKIDYLVAGEKPGNKYKKAVELGVGILNEDQWYRMINSEVSE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3BA_A_7(3BAA)
DNLJ_ENTFA
[Raw transfer]




3BD_A_7(3BAB)
DNLJ_ENTFA
[Raw transfer]




AMP_D_10(2OWO)
DNLJ_ECOLI
[Raw transfer]




IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]




0OW_A_5(4EFB)
DNLJ_ENTFA
[Raw transfer]




3B8_A_6(3BA8)
DNLJ_ENTFA
[Raw transfer]




AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]




AMP_B_2(1ZAU)
DNLJ_MYCTU
[Raw transfer]




0OV_A_5(4EFE)
DNLJ_ENTFA
[Raw transfer]




3B9_A_5(3BAC)
DNLJ_HAEIN
[Raw transfer]




0OX_A_5(4EEQ)
DNLJ_ENTFA
[Raw transfer]




3B9_A_7(3BA9)
DNLJ_ENTFA
[Raw transfer]




0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




L5Y_A_3(4CC6)
DNLJ_STAAU
[Raw transfer]




1X8_A_2(4LH7)
DNLJ_ENTFA
[Raw transfer]




GOL_E_5(1TA8)
DNLJ_ENTFA
[Raw transfer]




AMP_A_2(3SGI)
DNLJ_MYCTU
[Raw transfer]




AMP_A_2(3SGI)
DNLJ_MYCTU
[Raw transfer]




1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]




AMP_B_6(1DGS)
DNLJ_THEFI
[Raw transfer]




L5V_A_3(4CC5)
DNLJ_STAAU
[Raw transfer]




NACID_D_3(4GLX)
DNLJ_ECOLI
[Raw transfer]

-

NACID_D_3(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_D_3(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(4GLX)
DNLJ_ECOLI
[Raw transfer]

-

2 PsiBlast_PDB 90.5240% -83 - C2 -4GLX 6.5 DNLJ_ECOLI
1 PsiBlast_PDB 90.4640% -80 - C2 -2OWO 6.8 DNLJ_ECOLI
32 HHSearch 89.3041% -79 - C2 -2OWO 6.6 DNLJ_ECOLI
53 Fugue 88.0638% -69 - C2 -1DGS 5.1 DNLJ_THEFI
3 PsiBlast_PDB 83.4037% -60 - C2 -1DGS 5.1 DNLJ_THEFI
21 PsiBlast_CBE 81.6737% -59 - C2 -1DGS 5.5 DNLJ_THEFI
22 PsiBlast_CBE 81.4441% -63 - C2 -1V9P - DNLJ_THEFI -
4 PsiBlast_PDB 81.4241% -67 - C2 -1V9P - DNLJ_THEFI -
13 PsiBlast_PDB 66.9439% -66 - C2 -3BA8 6.0 DNLJ_ENTFA
27 PsiBlast_CBE 66.7239% -66 - C2 -4EFE 6.7 DNLJ_ENTFA
18 PsiBlast_PDB 66.3939% -64 - C2 -1TA8 2.1 DNLJ_ENTFA
19 PsiBlast_PDB 66.2939% -65 - C2 -4EEQ 4.7 DNLJ_ENTFA
14 PsiBlast_PDB 66.2039% -65 - C2 -3BA9 7.2 DNLJ_ENTFA
15 PsiBlast_PDB 66.0239% -65 - C2 -3BAA 7.9 DNLJ_ENTFA
20 PsiBlast_PDB 65.9239% -66 - C2 -4EFB 6.1 DNLJ_ENTFA
6 PsiBlast_PDB 65.4944% -54 - C2 -3JSL - DNLJ_STAAU -
35 HHSearch 65.4842% -53 - C2 -3UQ8 6.5 DNLJ_HAEIN
23 PsiBlast_CBE 65.1544% -52 - C2 -3JSL - DNLJ_STAAU -
54 Fugue 64.9442% -58 * C2 *1B04 - DNLJ_GEOSE -
16 PsiBlast_PDB 64.7539% -65 - C2 -3BAB 7.9 DNLJ_ENTFA
9 PsiBlast_PDB 64.5742% -53 - C2 -3PN1 7.0 DNLJ_HAEIN
29 PsiBlast_CBE 64.4639% -63 - C2 -4LH6 4.6 DNLJ_ENTFA
10 PsiBlast_PDB 64.4443% -50 - C2 -3UQ8 6.5 DNLJ_HAEIN
7 PsiBlast_PDB 64.3344% -54 - C2 -4CC5 4.2 DNLJ_STAAU
33 HHSearch 64.1234% -35 - C2 -3SGI 4.6 DNLJ_MYCTU
28 PsiBlast_CBE 64.0939% -64 - C2 -4LH7 4.7 DNLJ_ENTFA
5 PsiBlast_PDB 63.9434% -42 - C2 -3SGI 4.6 DNLJ_MYCTU
8 PsiBlast_PDB 63.0644% -52 - C2 -4CC6 6.8 DNLJ_STAAU
30 PsiBlast_CBE 58.2437% -45 - C2 -1ZAU 4.4 DNLJ_MYCTU
37 HHSearch 57.5437% -38 - C2 -1ZAU 4.4 DNLJ_MYCTU
17 PsiBlast_PDB 56.8445% -50 - C2 -3BAC 7.8 DNLJ_HAEIN