@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0171: (2016-03-12 )
MSNGAVFFVIFLKQATCNTYFKEVKIYHLGEMDMKIVALFPEAVEGQENQLLNTKKAIGLKTFLEERGHEFIILADNGEDLDKHLPDMDVIISAPFYPAYMTRERIEKAPNLKLAITAGVGSDHVDLAAASEHNIGVVEVTGSNTVSVAEHAVMDLLILLRNYEEGHRQSVEGEWNLSQVGNHAHELQHKTIGIFGFGRIGQLVAERLAPFNVTLQHYDPINQQDHKLSKFVSFDELVSSSDAITIHAPLTPETDNLFDKDVLSRMKKHSYLVNTARGKIVNRDALVEALASEHLQGYAGDVWYPQPAPADHPWRTMPRNAMTVHYSGMTLEAQKRIEDGVKDILERFFNHEPFQDKDIIVASGRIASKSYTAK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_3(4XYB)
?
[Raw transfer]




NDP_B_8(4XYB)
?
[Raw transfer]




NAD_B_4(4XYE)
?
[Raw transfer]




NAD_B_7(2NAD)
FDH_PSESR
[Raw transfer]




NAD_A_6(2NAD)
FDH_PSESR
[Raw transfer]




NAD_A_3(4XYE)
?
[Raw transfer]




NAD_D_4(1WWK)
?
[Raw transfer]




NAD_A_3(2GSD)
?
[Raw transfer]




NAD_C_3(1WWK)
?
[Raw transfer]




GOL_A_6(3JTM)
FDH_ARATH
[Raw transfer]




GOL_A_2(3FN4)
?
[Raw transfer]




GOL_A_8(3JTM)
FDH_ARATH
[Raw transfer]




GOL_A_13(3JTM)
FDH_ARATH
[Raw transfer]




GOL_A_8(3JTM)
FDH_ARATH
[Raw transfer]




NHE_E_5(2CUK)
?
[Raw transfer]




33 PsiBlast_CBE 94.2247%-100 - C2 -3N7U - FDH_ARATH -
4 PsiBlast_PDB 94.2247%-104 - C2 -3N7U - FDH_ARATH -
5 PsiBlast_PDB 94.1047%-110 * C2 *3JTM 3.0 FDH_ARATH
24 PsiBlast_CBE 94.0047%-103 - C2 -3N7U - FDH_ARATH -
30 PsiBlast_CBE 93.2747%-104 - C2 -3N7U - FDH_ARATH -
34 PsiBlast_CBE 93.2047%-109 - C2 -3NAQ - FDH_ARATH -
6 PsiBlast_PDB 93.0747%-109 - C2 -3NAQ - FDH_ARATH -
32 PsiBlast_CBE 93.0547%-100 - C2 -3N7U - FDH_ARATH -
31 PsiBlast_CBE 93.0047%-102 - C2 -3N7U - FDH_ARATH -
80 HHSearch 87.7246%-105 - C2 -3JTM 2.4 FDH_ARATH
101 Fugue 87.6342% -97 - C2 -2NAC - FDH_PSESR -
81 HHSearch 86.2545%-103 - C2 -2J6I - FDH_CANBO -
42 PsiBlast_CBE 85.6045%-100 - C2 -2J6I - FDH_CANBO -
2 PsiBlast_PDB 85.5545% -95 - C2 -2NAC - FDH_PSESR -
13 PsiBlast_PDB 85.4245%-102 - C2 -2FSS - FDH_CANBO -
12 PsiBlast_PDB 85.2346% -95 - C2 -4XYG - ? -
14 PsiBlast_PDB 84.9245% -99 - C2 -2J6I - FDH_CANBO -
11 PsiBlast_PDB 84.6446% -94 - C2 -4XYE 9.7 ?
38 PsiBlast_CBE 84.3646% -94 - C2 -4XYB 11.2 ?
41 PsiBlast_CBE 84.2645%-102 - C2 -2J6I - FDH_CANBO -
21 PsiBlast_CBE 84.0745% -95 - C2 -2NAD 9.6 FDH_PSESR
37 PsiBlast_CBE 83.9846% -92 - C2 -4XYE 9.8 ?
10 PsiBlast_PDB 83.6046% -92 - C2 -4XYB 11.6 ?
3 PsiBlast_PDB 83.5245% -91 - C2 -2NAD 9.5 FDH_PSESR
8 PsiBlast_PDB 83.2545% -96 - C2 -2GSD 9.3 ?
9 PsiBlast_PDB 81.8645% -96 - C2 -3FN4 2.8 ?
56 PsiBlast_CBE 53.8935% -83 - C2 -2CUK 3.4 ?
19 PsiBlast_PDB 52.5038% -83 - C2 -1WWK 6.9 ?
46 PsiBlast_CBE 52.0838% -86 - C2 -1WWK 8.0 ?