@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0347: (2016-03-14 )
MKDTQLAQITLTDDSTGAIANPIHLSTAYKHPKLGQSTGFDYTRTKNPTRSTFETCFAKLEHGIASFATSSGMSAIQLICNLFKPHDEILVSFDLYGGTFRLFEFYEQQYDIKFKYVDFTDYEQVEKEITDKTVALFIEPISNPQMIAIDVKPYYQLCKAKGLLSIIDNTFLTPYLSTPLAEGADIVLHSATKYIGGHNDVLAGVVTVKDESLAQQLFDFHNMTGATLSPIDSYLLLRGLKTLHLRIERAQSNARKLAKKCQSLQAIDEVLYSGQTGMLSLRLNKAYSVAKLLENLDICIFAESLGGTETLVTFPYTQTHVDMPDAEKDKRGIDEYLIRLSLGVENYEDIERDIIQALDKAQIGEIV

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLG_A_2(4HF8)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



PPJ_A_3(1E5E)
?
[Raw transfer]



LCS_A_2(4OMA)
?
[Raw transfer]



PLP_B_8(1E5F)
?
[Raw transfer]



PLP_A_3(1E5F)
?
[Raw transfer]



PPJ_B_7(1E5E)
?
[Raw transfer]



PZP_A_2(3MKJ)
?
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



PLP_A_11(1IBJ)
METC_ARATH
[Raw transfer]



NLE_A_2(3JWB)
?
[Raw transfer]



PLP_A_3(2CTZ)
?
[Raw transfer]



PLP_C_13(1IBJ)
METC_ARATH
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



EDO_A_22(1PFF)
?
[Raw transfer]



MPJ_A_2(3JWA)
?
[Raw transfer]



ECX_A_2(3JW9)
?
[Raw transfer]
102 HHSearch 90.5838% -95 - C1 -3COG - CGL_HUMAN -
122 Fugue 90.4737% -96 - C1 -1CS1 - METB_ECOLI -
28 PsiBlast_CBE 90.2938% -99 - C1 -4IY7 - ? -
30 PsiBlast_CBE 90.0338% -99 - C1 -4IY7 - ? -
3 PsiBlast_PDB 89.6638% -99 - C1 -4IYO - ? -
26 PsiBlast_CBE 89.4839%-102 - C1 -4L0O - METB_HELPY -
29 PsiBlast_CBE 89.2838% -99 - C1 -4IY7 - ? -
104 HHSearch 88.7737% -88 - C1 -1CS1 - METB_ECOLI -
5 PsiBlast_PDB 88.7336% -91 - C1 -1CS1 - METB_ECOLI -
32 PsiBlast_CBE 88.5838% -96 - C1 -3COG - CGL_HUMAN -
2 PsiBlast_PDB 88.4438% -97 - C1 -4IY7 - ? -
23 PsiBlast_CBE 88.1939% -99 - C1 -4L0O - METB_HELPY -
31 PsiBlast_CBE 87.9436% -93 - C1 -1CS1 - METB_ECOLI -
1 PsiBlast_PDB 87.5039%-101 - C1 -4L0O - METB_HELPY -
33 PsiBlast_CBE 86.8038% -96 - C1 -3COG - CGL_HUMAN -
115 HHSearch 86.5837%-108 * C1 *1PFF 2.0 ?
24 PsiBlast_CBE 86.3639%-103 - C1 -4L0O - METB_HELPY -
21 PsiBlast_CBE 86.2439%-104 - C1 -4L0O - METB_HELPY -
108 HHSearch 85.9835% -97 - C1 -2RFV - ? -
27 PsiBlast_CBE 85.9739%-106 - C1 -4L0O - METB_HELPY -
8 PsiBlast_PDB 85.6134% -96 - C1 -3MKJ 4.8 ?
7 PsiBlast_PDB 85.4234% -97 - C1 -4HF8 6.0 ?
9 PsiBlast_PDB 85.4134% -97 - C1 -4OMA 6.2 ?
107 HHSearch 85.2334% -97 - C1 -1IBJ 4.0 METC_ARATH
103 HHSearch 85.1035% -93 - C1 -1E5E 5.3 ?
13 PsiBlast_PDB 84.5533% -95 - C1 -3JWA 2.2 ?
12 PsiBlast_PDB 84.0633% -96 - C1 -3JW9 3.4 ?
14 PsiBlast_PDB 83.4633% -94 - C1 -3JWB 1.9 ?
63 PsiBlast_CBE 83.2336%-101 - C1 -1PFF 2.0 ?
58 PsiBlast_CBE 83.2335% -95 - C1 -1E5F 3.7 ?
61 PsiBlast_CBE 81.5535% -96 - C1 -1E5E 5.3 ?
6 PsiBlast_PDB 81.1933% -95 - C1 -1IBJ 4.0 METC_ARATH
59 PsiBlast_CBE 80.8135% -95 - C1 -1E5F 3.6 ?
60 PsiBlast_CBE 80.0835% -96 - C1 -1E5E 5.0 ?
110 HHSearch 78.2430% -86 - C1 -2CTZ 4.6 ?
37 PsiBlast_CBE 78.2233% -94 - C1 -1IBJ 3.4 METC_ARATH