@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0365: (2016-03-14 )
MLNADLKQQLKQLLELMEGNVEFVASLGSDEKSKELKELLTEISDMSPRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKNLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREESENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDIDAMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMSTGEEHLLNLDGIFVQIGLLPNTSWLKDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(1HYU)
AHPF_SALTY
[Raw transfer]



FAD_B_4(2Q7V)
?
[Raw transfer]



FAD_B_7(2A87)
TRXB_MYCTU
[Raw transfer]



FAD_A_5(1HYU)
AHPF_SALTY
[Raw transfer]



FAD_G_7(1FL2)
AHPF_ECOLI
[Raw transfer]



FAD_A_2(4YKF)
?
[Raw transfer]



FAD_B_4(3CTY)
?
[Raw transfer]



FAD_A_5(1HYU)
AHPF_SALTY
[Raw transfer]



FAD_G_7(1FL2)
AHPF_ECOLI
[Raw transfer]



FAD_A_2(4YKG)
?
[Raw transfer]
102 HHSearch 94.7854% -94 - C3 -1HYU 12.5 AHPF_SALTY
3 PsiBlast_PDB 94.2253% -92 - C3 -1HYU 12.5 AHPF_SALTY
92 Fugue 94.0653% -94 - C3 -1HYU 12.5 AHPF_SALTY
2 PsiBlast_PDB 93.2154%-100 - C3 -4YKG 12.8 ?
1 PsiBlast_PDB 92.7554% -99 - C3 -4YKF 12.3 ?
104 HHSearch 72.7459% -99 - C3 -1FL2 12.6 AHPF_ECOLI
4 PsiBlast_PDB 69.8957% -90 - C3 -1FL2 12.5 AHPF_ECOLI
106 HHSearch 63.5533% -95 - C3 -2Q0L - TRXB_HELPY -
109 HHSearch 63.5333% -93 - C3 -3R9U - ? -
113 HHSearch 63.2639% -84 - C3 -3CTY Error ?
14 PsiBlast_PDB 63.2132% -97 - C3 -2Q0K - TRXB_HELPY -
21 PsiBlast_CBE 62.9939% -86 - C3 -3CTY - ? -
7 PsiBlast_PDB 62.7539% -86 - C3 -3CTY - ? -
103 HHSearch 62.7032% -85 * C3 *3F8D - ? -
15 PsiBlast_PDB 62.6432% -94 - C3 -2Q0L - TRXB_HELPY -
35 PsiBlast_CBE 62.5332% -98 - C3 -2Q0L - TRXB_HELPY -
16 PsiBlast_PDB 62.1732% -93 - C3 -3ISH - TRXB_HELPY -
34 PsiBlast_CBE 61.8332% -93 - C3 -3ISH - TRXB_HELPY -
114 HHSearch 61.7632% -83 - C3 -1VDC - TRXB1_ARATH -
36 PsiBlast_CBE 61.7332% -95 - C3 -2Q0K - TRXB_HELPY -
111 HHSearch 61.1334% -86 - C3 -2Q7V Error ?
112 HHSearch 60.5331% -79 - C3 -2A87 Error TRXB_MYCTU