@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0742: (2016-03-18 )
MNMKKKEKHAIRKKSIGVASVLVGTLIGFGLLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVAQNPAQQETTQSSSTNATTEETPVTGEATTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNESAPQNTDASNKDVVSQAVNPSTPRMRAFSLAAVAADAPAAGTDITNQLTDVKVTIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNLNGVTSTAKVPPIMAGDQVLANGVIDSDGNVIYTFTDYVDNKENVTANITMPAYIDPENVTKTGNVTLTTGIGTNTASKTVLIDYEKYGQFHNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVVLPALTGNLIPNTKSNALIDAKNTDIKVYRVDNANDLSESYYVNPSDFEDVTNQVRISFPNANQYKVEFPTDDDQITTPYIVVVNGHIDPASTGDLALRSTFYGYDSNFIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLLASLGSLLLFRRKKENKDKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_C_3(2VR3)
CLFA_STAA8
[Raw transfer]
-
46 Fugue 97.9487% -89 - C9 -1N67 - CLFA_STAAE -
1 PsiBlast_PDB 97.6387% -90 - C9 -1N67 - CLFA_STAAE -
21 HHSearch 96.7987% -86 - C9 -1N67 - CLFA_STAAE -
2 PsiBlast_PDB 92.5786% -99 - C9 -2VR3 12.6 CLFA_STAA8
22 HHSearch 68.2817% -71 - C9 -3IRP - -
48 Fugue 63.4316% -9 * C9 *3IRP - UAFA_STAS1 -
7 PsiBlast_PDB 63.3330% -74 - C9 -2RAL - SDRG_STAEP -
20 PsiBlast_CBE 63.0831% -73 - C9 -1R17 - SDRG_STAEP -
5 PsiBlast_PDB 62.9031% -69 - C9 -1R17 - SDRG_STAEP -
4 PsiBlast_PDB 61.8528% -90 - C9 -4B5Z - FNBA_STAA8 -
3 PsiBlast_PDB 60.6428% -90 - C- -4B60 - FNBA_STAA8 -
6 PsiBlast_PDB 58.8931% -83 - C9 -1R19 - SDRG_STAEP -
14 PsiBlast_PDB 58.3626% -65 - C9 -4F24 - CLFB_STAAR -
9 PsiBlast_PDB 56.9125% -71 - C9 -3AU0 - CLFB_STAAN -
12 PsiBlast_PDB 56.5026% -73 - C9 -4F1Z - CLFB_STAAR -
13 PsiBlast_PDB 55.1426% -68 - C9 -4F20 - CLFB_STAAR -
8 PsiBlast_PDB 55.0625% -72 - C9 -3AT0 - CLFB_STAAN -
11 PsiBlast_PDB 54.9926% -65 - C9 -4F27 - CLFB_STAAR -
10 PsiBlast_PDB 54.6927% -80 - C9 -3ASW - CLFB_STAAN -
23 HHSearch 50.9915% -74 - C10 -3V10 - ? -