@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1554: (2016-03-26 )
MKVEVYKGAQGKHNLKDYEETYNTFDWKDVEQAFSWSETGKMNMAYECIDRHVDQGLGDKIALNYKDEYRKESYTYKDMQRLSNKAANVLSEHAEVDKGDRVFIFMSRTPELYFALLGVLKIGAIVGPLFEAFMEKAVADRLENSEAKVLITNKALLPRVPVDKLPNLKKIVVVDEDVEDNYIDFISLMETASDEFDIEWLKSDDGLILHYTSGSTGQPKGVLHVQQAMLVHYISGKYVLDLQEDDVYWCTADPGWVTGTSYGIFAPWLNGATNCIAGGRFSPEQWYSMIEDFKVTIWYTAPTALRMLMSAGDDIVEKYDLSSLRSILSVGEPLNPEVIKWAKKVYGLTVLDTWWMTETGGHMIVNYPTMDVKLGSMGKPLPGIQAAIIDDAGNELPPNRMGNLAIKKGWPSMMYRIWKNPEKYKSYFIGDWYVSGDSAYKDEDGYFWFQGRVDDVIMTAGERVGPFEVESKLVEHEAVAEAGIIGKPDPVRGEIIKAFVALRKGYEPTDELKEEIRLFVKEGLSAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELNLDAGDLSTME

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



APC_A_7(3DAY)
ACS2A_HUMAN
[Raw transfer]



AMP_A_3(3EQ6)
ACS2A_HUMAN
[Raw transfer]



COA_A_4(3GPC)
ACS2A_HUMAN
[Raw transfer]



PRX_A_9(1PG4)
ACSA_SALTY
[Raw transfer]



AMP_B_5(3EQ6)
ACS2A_HUMAN
[Raw transfer]



COA_B_6(3GPC)
ACS2A_HUMAN
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_22(3ETC)
?
[Raw transfer]



GOL_A_12(3ETC)
?
[Raw transfer]



EDO_A_12(1PG4)
ACSA_SALTY
[Raw transfer]
55 Fugue 95.4336% -80 - C3 -1PG4 6.4 ACSA_SALTY
30 HHSearch 92.9232% -91 - C3 -3C5E 8.3 ACS2A_HUMAN
3 PsiBlast_PDB 91.3532%-100 - C3 -3C5E 8.3 ACS2A_HUMAN
21 PsiBlast_CBE 91.0432% -91 - C3 -3ETC 3.5 ?
4 PsiBlast_PDB 90.9732%-101 - C3 -3DAY 8.7 ACS2A_HUMAN
23 PsiBlast_CBE 89.8332% -98 - C3 -2WD9 - ACS2A_HUMAN -
27 PsiBlast_CBE 89.6232% -95 - C3 -2VZE - ACS2A_HUMAN -
1 PsiBlast_PDB 89.2732% -96 - C3 -2WD9 - ACS2A_HUMAN -
26 PsiBlast_CBE 89.1432% -96 - C3 -2VZE - ACS2A_HUMAN -
22 PsiBlast_CBE 89.1132% -97 - C3 -2WD9 - ACS2A_HUMAN -
6 PsiBlast_PDB 89.0232% -94 - C3 -3EQ6 5.9 ACS2A_HUMAN
24 PsiBlast_CBE 88.9232% -99 - C3 -3GPC 4.6 ACS2A_HUMAN
2 PsiBlast_PDB 88.7432% -95 - C3 -3B7W - ACS2A_HUMAN -
25 PsiBlast_CBE 88.5232% -93 - C3 -3EQ6 5.9 ACS2A_HUMAN
7 PsiBlast_PDB 88.2132%-100 - C3 -3GPC 5.7 ACS2A_HUMAN
5 PsiBlast_PDB 88.0132% -95 - C3 -2VZE - ACS2A_HUMAN -
31 HHSearch 85.4632% -85 - C3 -3ETC 1.5 ?
14 PsiBlast_PDB 81.5427% -75 - C3 -2D1R - LUCI_LUCCR -
15 PsiBlast_PDB 81.2827% -73 - C3 -2D1S - LUCI_LUCCR -
9 PsiBlast_PDB 80.8228% -80 - C3 -4EAT - ? -