@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2072: (2016-03-31 )
MLKINVKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMIAGLRKADEAIIEVNGQLLTDTTKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAEPSKHIDQLIQTLNINHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDTTKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




102 Fugue 90.2633%-128 - C1 -1Z47 - ? -
110 HHSearch 87.6334%-123 - C1 -1Z47 - ? -
114 HHSearch 86.7036%-115 - C1 -3FVQ - FBPC_NEIG1 -
22 PsiBlast_CBE 86.5837%-113 - C1 -2ONK - WTPC_ARCFU -
21 PsiBlast_CBE 86.4437%-113 - C1 -2ONK - WTPC_ARCFU -
1 PsiBlast_PDB 86.2337%-110 - C1 -2ONK - WTPC_ARCFU -
23 PsiBlast_CBE 86.0337%-114 - C1 -2ONK - WTPC_ARCFU -
112 HHSearch 84.8139%-116 - C1 -2IT1 - ? -
25 PsiBlast_CBE 84.1639%-119 - C1 -2IT1 - ? -
117 HHSearch 82.2636%-119 - C1 -2YYZ - ? -
2 PsiBlast_PDB 81.6635%-130 - C1 -1Z47 - ? -
24 PsiBlast_CBE 81.5735%-131 - C1 -1Z47 - ? -
118 HHSearch 81.4133%-120 - C1 -3RLF - MALK_ECOLI -
113 HHSearch 81.3235%-119 - C1 -1V43 - ? -
103 Fugue 81.2033%-110 - C1 -1OXS - ? -
53 PsiBlast_CBE 80.8637%-118 - C1 -3FVQ 4.6 FBPC_NEIG1
116 HHSearch 80.3134%-115 - C1 -1OXX - ? -
111 HHSearch 80.0935%-118 - C1 -3D31 - ? -
52 PsiBlast_CBE 79.8937%-113 - C1 -3FVQ 5.6 FBPC_NEIG1
115 HHSearch 78.5730%-119 - C1 -3TUI - METN_ECOLI -
92 PsiBlast_CBE 73.3831%-118 - C1 -4MKI 2.0 ECFA2_CALS4
91 PsiBlast_CBE 73.0031%-117 - C1 -4MKI 2.2 ECFA2_CALS4
68 PsiBlast_CBE 69.1333%-107 - C1 -3C41 4.1 ?
77 PsiBlast_CBE 68.7531%-108 - C1 -3TIF 5.5 Y796_METJA
76 PsiBlast_CBE 68.1231%-103 - C1 -3TIF 5.2 Y796_METJA
67 PsiBlast_CBE 68.0532% -99 - C1 -2OLJ 3.8 ?
62 PsiBlast_CBE 67.8632% -96 - C1 -2OLK 4.3 ?
73 PsiBlast_CBE 67.6831%-111 - C1 -4YMU 4.7 ?
10 PsiBlast_PDB 67.5735%-120 - C1 -1VCI 3.5 ?
12 PsiBlast_PDB 67.5236%-114 - C1 -2D62 3.1 ?
63 PsiBlast_CBE 67.2632% -94 * C1 *2OLK 4.1 ?
64 PsiBlast_CBE 67.0332% -94 - C1 -2OLK 4.2 ?
71 PsiBlast_CBE 66.9831%-103 - C1 -4YMV 5.4 ?
69 PsiBlast_CBE 66.6133%-104 - C1 -3C41 5.3 ?
66 PsiBlast_CBE 66.5132% -93 - C1 -2OLJ 3.7 ?
57 PsiBlast_CBE 66.5032% -98 - C1 -2Q0H 3.2 ?
72 PsiBlast_CBE 66.0831%-107 - C1 -4YMU 5.0 ?
75 PsiBlast_CBE 65.9731%-105 - C1 -1L2T 5.1 Y796_METJA
65 PsiBlast_CBE 65.7232% -94 - C1 -2OLK 3.7 ?
74 PsiBlast_CBE 65.6531%-101 - C1 -1L2T 5.5 Y796_METJA
54 PsiBlast_CBE 65.4332% -97 - C1 -3C4J 3.3 ?
70 PsiBlast_CBE 65.2031%-105 - C1 -4YMV 3.8 ?
55 PsiBlast_CBE 64.9232% -90 - C1 -3C4J 4.7 ?
97 PsiBlast_CBE 54.2931%-102 - C1 -1B0U 4.5 HISP_SALTY
90 PsiBlast_CBE 54.1532% -95 - C1 -4U00 4.5 ?