@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2327: (2016-04-03 )
MAKIKANEALVKALQAWDIDHLYGIPGDSIDAVVDSLRTVRDQFKFYHVRHEEVASLAAAGYTKLTGKIGVALSIGGPGLIHLLNGMYDAKMDNVPQLILSGQTNSTALGTKAFQETNLQKLCEDVAVYNHQIEKGDNVFEIVNEAIRTAYEQKGVAVVICPNDLLTEKIKDTTNKPVDTSRPTVVSPKYKDIKKAVKLINKSKKPVMLIGVGAKHAKDELREFIEMAKIPVIHSLPAKTILPDDHPYSIGNLGKIGTKTSYQTMQEADLLIMVGTNYPYVDYLPKKNIKAIQIDTNPKNIGHRFNINVGIVGDSKIALHQLTENIKHVAERPFLNKTLERKAVWDKWMEQDKNNNSKPLRPERLMASINKFIKDDAVISADVGTATVWSTRYLNLGVNNKFIISSWLGTMGCGLPGAMASKIAYPNRQAIAIAGDGAFQMVMQDFATAVQYDLPLTVFVLNNKQLAFIKYEQQAAGELEYAVDFSDMDHAKFAEAAGGKGYTIKSASEVDAIVEEALAQDVPTIVDVYVDPNAAPLPGKIVNEEALGYGKWAFRSITEDKYLDLDQIPPISVAAKRFL

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TDK_B_9(2EZ9)
POXB_LACPL
[Raw transfer]



TDK_A_7(2EZ9)
POXB_LACPL
[Raw transfer]



TDL_A_7(2EZ8)
POXB_LACPL
[Raw transfer]



TDL_B_10(2EZ8)
POXB_LACPL
[Raw transfer]



TDP_A_6(4KGD)
?
[Raw transfer]



TDM_B_16(4FEE)
?
[Raw transfer]



TDM_B_12(2EZT)
POXB_LACPL
[Raw transfer]



TDP_B_14(4KGD)
?
[Raw transfer]



TPP_B_9(1POX)
POXB_LACPL
[Raw transfer]



TDM_A_10(4FEE)
?
[Raw transfer]



TPP_A_8(1V5F)
?
[Raw transfer]



HTL_A_4(1V5G)
?
[Raw transfer]



TDM_B_21(4FEG)
?
[Raw transfer]



TPP_A_9(2EZ4)
POXB_LACPL
[Raw transfer]



TPP_B_11(2EZ4)
POXB_LACPL
[Raw transfer]



TDM_A_10(4FEG)
?
[Raw transfer]



TPP_A_5(1POW)
POXB_LACPL
[Raw transfer]



TPP_A_7(1POX)
POXB_LACPL
[Raw transfer]



TPP_B_7(1POW)
POXB_LACPL
[Raw transfer]



TDP_A_3(3EY9)
POXB_ECOLI
[Raw transfer]



TDP_B_7(3EY9)
POXB_ECOLI
[Raw transfer]



GOL_A_11(1POX)
POXB_LACPL
[Raw transfer]



GOL_B_12(1POX)
POXB_LACPL
[Raw transfer]



GOL_A_11(1POX)
POXB_LACPL
[Raw transfer]
24 PsiBlast_CBE 94.8534% -86 - C7 -1POW 6.5 POXB_LACPL
28 PsiBlast_CBE 94.7034% -88 - C7 -1Y9D - POXB_LACPL -
34 PsiBlast_CBE 94.6832% -90 - C7 -3EY9 6.5 POXB_ECOLI
23 PsiBlast_CBE 94.5634% -85 - C7 -4FEE 7.6 ?
12 PsiBlast_PDB 94.5132% -91 - C7 -3EY9 6.4 POXB_ECOLI
6 PsiBlast_PDB 94.1334% -91 - C7 -1Y9D - POXB_LACPL -
3 PsiBlast_PDB 94.0434% -85 - C7 -4KGD 7.3 ?
21 PsiBlast_CBE 94.0334% -85 - C7 -4KGD 7.4 ?
26 PsiBlast_CBE 93.9934% -89 - C7 -1Y9D - POXB_LACPL -
2 PsiBlast_PDB 93.9534% -83 - C7 -4FEG 7.7 ?
1 PsiBlast_PDB 93.9434% -84 - C7 -4FEE 7.4 ?
46 HHSearch 93.9133% -93 - C7 -3EYA - POXB_ECOLI -
27 PsiBlast_CBE 93.8934% -91 - C7 -1Y9D - POXB_LACPL -
25 PsiBlast_CBE 93.7334% -84 - C7 -1POX 7.1 POXB_LACPL
4 PsiBlast_PDB 93.5534% -86 - C7 -1POW 7.0 POXB_LACPL
45 PsiBlast_CBE 93.2532% -98 - C7 -3EYA - POXB_ECOLI -
31 PsiBlast_CBE 93.1634% -85 - C7 -2EZ9 6.9 POXB_LACPL
9 PsiBlast_PDB 93.0734% -84 - C7 -2EZ9 6.1 POXB_LACPL
33 PsiBlast_CBE 92.9934% -85 - C7 -2EZ4 7.0 POXB_LACPL
29 PsiBlast_CBE 92.9734% -86 - C7 -2EZU - POXB_LACPL -
22 PsiBlast_CBE 92.9634% -84 - C7 -4FEG 7.5 ?
8 PsiBlast_PDB 92.7234% -85 - C7 -2EZ8 6.3 POXB_LACPL
32 PsiBlast_CBE 92.6934% -83 - C7 -2EZ8 6.9 POXB_LACPL
30 PsiBlast_CBE 92.5934% -84 - C7 -2EZT 7.6 POXB_LACPL
7 PsiBlast_PDB 92.5934% -85 - C7 -2EZ4 7.4 POXB_LACPL
5 PsiBlast_PDB 92.5834% -84 - C7 -1POX 7.1 POXB_LACPL
14 PsiBlast_PDB 90.7933% -82 - C7 -1V5F 6.1 ?
15 PsiBlast_PDB 90.6133% -81 - C7 -1V5G 7.1 ?
71 Fugue 89.6133% -83 - C7 -1POX 2.8 POXB_LACPL