@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2416: (2016-04-04 )
MLLEVKHVKKVYGKGLNATTALNQMNLSVGAGEFVAIMGESGSGKSTLLNLIASFDGLTEGDIIVDGAHLNNMKNKSKALYRQQMVGFVFQDFNLLPTMTNKENIMMPLILAGAKRKDIEQRVHQLAVQLHLEGFLNKYPSEISGGQKQRIAIARALVTKPTILLADEPTGALDSKTSKALMMLFQEIHQLEQTILMVTHSNIDASYAERVIFIKDGRLYHEIYRGEESQLAFQQRITDSLALVNGGSVNI

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AGS_B_4(4S0F)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




9 PsiBlast_PDB 89.5534%-114 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 87.7834%-106 - C1 -3TUZ - METN_ECOLI -
29 PsiBlast_CBE 87.6934%-107 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 87.6034%-112 - C1 -3TUI - METN_ECOLI -
28 PsiBlast_CBE 86.7934%-114 - C1 -3TUI - METN_ECOLI -
8 PsiBlast_PDB 86.6834%-111 - C1 -3TUI - METN_ECOLI -
122 HHSearch 84.0241%-110 - C1 -3TIF - Y796_METJA -
27 PsiBlast_CBE 83.3134%-111 - C1 -3TUZ - METN_ECOLI -
5 PsiBlast_PDB 83.1640%-112 - C1 -2PCL - LOLD_AQUAE -
25 PsiBlast_CBE 82.8334%-114 - C1 -3TUZ - METN_ECOLI -
3 PsiBlast_PDB 82.7141% -99 - C1 -1F3O - Y796_METJA -
117 HHSearch 82.3741%-111 - C1 -2PCJ - LOLD_AQUAE -
23 PsiBlast_CBE 82.0840%-111 - C1 -2PCJ - LOLD_AQUAE -
22 PsiBlast_CBE 81.5241% -99 - C1 -3TIF - Y796_METJA -
1 PsiBlast_PDB 81.3641% -98 - C1 -1L2T - Y796_METJA -
6 PsiBlast_PDB 81.3135%-107 - C1 -3DHW - METN_ECOLI -
56 PsiBlast_CBE 80.9133%-119 - C1 -4U02 - ? -
2 PsiBlast_PDB 80.5741% -98 - C1 -3TIF - Y796_METJA -
4 PsiBlast_PDB 80.0740%-111 - C1 -2PCJ - LOLD_AQUAE -
58 PsiBlast_CBE 79.6933%-110 - C1 -4U02 - ? -
89 PsiBlast_CBE 78.4933%-103 - C1 -4MKI 2.1 ECFA2_CALS4
96 PsiBlast_CBE 76.5034%-111 - C1 -1B0U 5.7 HISP_SALTY
88 PsiBlast_CBE 75.4533% -98 - C1 -4MKI 4.0 ECFA2_CALS4
78 PsiBlast_CBE 68.8235%-112 - C1 -2OLK 6.2 ?
70 PsiBlast_CBE 68.5735%-114 - C1 -3C4J 5.2 ?
85 PsiBlast_CBE 68.3035%-106 - C1 -3C41 6.9 ?
83 PsiBlast_CBE 67.7835%-118 - C1 -2OLJ 5.7 ?
79 PsiBlast_CBE 67.2735%-114 - C1 -2OLK 6.2 ?
80 PsiBlast_CBE 66.8435%-111 - C1 -2OLK 6.1 ?
73 PsiBlast_CBE 66.3135%-108 - C1 -2Q0H 5.6 ?
81 PsiBlast_CBE 65.7435%-113 - C1 -2OLK 6.0 ?
72 PsiBlast_CBE 65.7035%-112 - C1 -2Q0H 5.9 ?
71 PsiBlast_CBE 65.4735%-108 - C1 -3C4J 6.7 ?
82 PsiBlast_CBE 64.4935%-106 - C1 -2OLJ 5.9 ?
84 PsiBlast_CBE 64.4035%-113 - C1 -3C41 5.9 ?
92 PsiBlast_CBE 60.6632% -81 - C1 -2ONJ 5.8 Y1866_STAAM
94 PsiBlast_CBE 60.3032% -82 - C1 -2HYD 4.2 Y1866_STAAM
93 PsiBlast_CBE 59.5232% -81 - C1 -2ONJ 5.6 Y1866_STAAM
95 PsiBlast_CBE 58.9532% -81 - C1 -2HYD 4.3 Y1866_STAAM
91 PsiBlast_CBE 45.2634% -88 - C1 -4S0F 2.9 ?
90 PsiBlast_CBE 43.1334% -90 - C1 -4S0F 1.9 ?