@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2500: (2016-04-04 )
MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H2S_A_10(3SX6)
SQRD_ACIF2
[Raw transfer]



FAD_A_3(2ZXH)
MNMG_AQUAE
[Raw transfer]



FAD_B_4(2ZXH)
MNMG_AQUAE
[Raw transfer]
3 PsiBlast_PDB 91.3151% -65 - C5 -2ZXH 12.6 MNMG_AQUAE
24 PsiBlast_CBE 91.2851% -66 - C5 -2ZXH 11.5 MNMG_AQUAE
22 PsiBlast_CBE 90.9051% -64 - C5 -2ZXI - MNMG_AQUAE -
21 PsiBlast_CBE 90.6651% -65 - C5 -2ZXI - MNMG_AQUAE -
23 PsiBlast_CBE 90.6551% -64 - C5 -2ZXI - MNMG_AQUAE -
27 PsiBlast_CBE 89.5746% -70 - C5 -3CP8 - MNMG_CHLTE -
28 PsiBlast_CBE 89.1746% -68 - C5 -3CP8 - MNMG_CHLTE -
5 PsiBlast_PDB 89.0446% -68 - C5 -3CP8 - MNMG_CHLTE -
110 HHSearch 88.4447% -64 - C5 -3CP8 - MNMG_CHLTE -
26 PsiBlast_CBE 84.0846% -67 - C5 -3CP8 - MNMG_CHLTE -
108 HHSearch 82.9351% -68 - C5 -3CES - MNMG_ECOLI -
2 PsiBlast_PDB 82.7651% -69 - C5 -3CES - MNMG_ECOLI -
25 PsiBlast_CBE 81.7352% -63 - C5 -3G05 - MNMG_ECO57 -
4 PsiBlast_PDB 80.5252% -66 - C5 -3G05 - MNMG_ECO57 -
1 PsiBlast_PDB 79.5051% -67 - C5 -3CP2 - MNMG_ECOLI -
111 HHSearch 53.3723% -48 - C5 -3G5S - TRMFO_THET8 -
133 Fugue 44.4623% -10 - C6 -4OPU - ? -
121 HHSearch 43.7827% -72 - C5 -2CUL - ? -
9 PsiBlast_PDB 42.3525% -73 - C5 -2CUL - ? -
132 Fugue 40.2816% -38 - C1 -2I0Z - ? -