@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0428: (2015-12-15 )
MSLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIVEAFKWVGLEHDGEILYQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETPRYDNRYRDFKGTPPKGIEPVVRIKVPQNEVIGFNDGVKGEVKVNTNEIDDFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLSKRHGATNVMDYQEMGYLKEALVNFLARLGWSYQDKEVFSMQELLEWFNPKDLNSSPSCFSWHKLNWLNAHYLKNQSVQELLKLLKPFSFSDLSHLNPAQLDRLLDALKERSQTLKELALKIDEVLTAPIEYEEKVFKKLNQALVMPLLEKFKLALDKTDFNDESALENAMHQIIEEEKIKAGHFMQPLRLALLGKGGGIGLKEALFILGKAESIKRIEEFLKN

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GSU_A_2(3AFH)
SYE2_THEMA
[Raw transfer]



GSU_A_2(3AFH)
SYE2_THEMA
[Raw transfer]



GLU_A_4(4GRI)
SYE_BORBU
[Raw transfer]



GLU_B_7(4GRI)
SYE_BORBU
[Raw transfer]



GLU_B_2(2CUZ)
SYE_THET8
[Raw transfer]



GLU_A_3(1J09)
SYE_THET8
[Raw transfer]



GLU_A_3(1J09)
SYE_THET8
[Raw transfer]



GLU_A_3(2CFO)
SYE_THEEB
[Raw transfer]



GLU_A_3(2CFO)
SYE_THEEB
[Raw transfer]
2 PsiBlast_PDB 95.7339%-100 - C5 -2O5R - SYE1_THEMA -
28 PsiBlast_CBE 95.7135% -99 - C5 -2CV0 - SYE_THET8 -
25 PsiBlast_CBE 95.0135% -99 - C5 -2DXI - SYE_THET8 -
26 PsiBlast_CBE 94.5935% -97 - C5 -2CV2 - SYE_THET8 -
10 PsiBlast_PDB 94.0835% -96 - C5 -1N75 - SYE_THET8 -
30 PsiBlast_CBE 94.0535% -96 - C5 -1N77 - SYE_THET8 -
17 PsiBlast_PDB 93.9335% -96 - C5 -2DXI - SYE_THET8 -
38 HHSearch 93.7240% -93 - C5 -2O5R - SYE1_THEMA -
1 PsiBlast_PDB 93.7241% -93 - C5 -2CFO 3.0 SYE_THEEB
29 PsiBlast_CBE 93.6935% -96 - C5 -1N78 - SYE_THET8 -
16 PsiBlast_PDB 93.6435% -96 - C5 -2CV2 - SYE_THET8 -
11 PsiBlast_PDB 93.6135% -97 - C5 -1N77 - SYE_THET8 -
27 PsiBlast_CBE 93.5335% -97 - C5 -2CV1 - SYE_THET8 -
14 PsiBlast_PDB 93.4335% -96 - C5 -2CV0 - SYE_THET8 -
9 PsiBlast_PDB 93.3935% -95 - C5 -1J09 3.0 SYE_THET8
8 PsiBlast_PDB 92.9435% -96 - C5 -1GLN - SYE_THET8 -
12 PsiBlast_PDB 92.8835% -97 - C5 -1N78 - SYE_THET8 -
13 PsiBlast_PDB 92.8035% -97 - C5 -2CUZ 2.2 SYE_THET8
21 PsiBlast_CBE 92.0937% -92 - C5 -4GRI 3.5 SYE_BORBU
15 PsiBlast_PDB 91.9335% -96 - C5 -2CV1 - SYE_THET8 -
33 HHSearch 91.7539% -88 - C5 -2CFO 3.0 SYE_THEEB
3 PsiBlast_PDB 90.8637% -94 - C5 -4GRI 3.4 SYE_BORBU
36 HHSearch 90.8037% -91 - C5 -3AFH 7.8 SYE2_THEMA
5 PsiBlast_PDB 90.6336% -90 - C5 -3AFH 7.8 SYE2_THEMA
35 HHSearch 89.1835% -91 * C5 *1J09 3.0 SYE_THET8