@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1245: (2015-12-22 )
MQFRIEHDTMGEIKVDDSQYWGAQTQRSLENFKIGTEKMPKELIGAFAKLKRSLAVVNHKLGKLSLEKSQAIIKACDCILKGELCGEFPLAIWQTGSGTQTNMNLNEVIANKATEILGGNFREKKLIHPNDDVNMSQSSNDTFPTAMHVVSVLEITHKLLPSLENLLKTFKEKSQQFKEIVKIGRTHLQDATPLTLGQEFSGYASMLEHSKQQILESLEHLRELAIGGTAVGTGLNAHKELSEKVAEELSQFSGVKFISAPNKFHALTSHDAIAYAHGAFKALAANLMKIANDIRWLASGPRCGLGELNIPENEPGSSIMPGKVNPTQCEAMTMVAVQVMGNDTAIGIAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNKEKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDQFVVPEKMIGPKA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMA_B_11(1FUP)
FUMC_ECOLI
[Raw transfer]



PMA_A_9(1FUP)
FUMC_ECOLI
[Raw transfer]



CIT_A_5(2FUS)
FUMC_ECOLI
[Raw transfer]



CIT_A_9(1FUO)
FUMC_ECOLI
[Raw transfer]



CIT_A_4(1FUQ)
FUMC_ECOLI
[Raw transfer]



CIT_G_7(1KQ7)
FUMC_ECOLI
[Raw transfer]



CIT_B_7(2FUS)
FUMC_ECOLI
[Raw transfer]



LMR_B_5(3RRP)
?
[Raw transfer]



LMR_A_3(3RRP)
?
[Raw transfer]



CIT_I_9(1KQ7)
FUMC_ECOLI
[Raw transfer]



CIT_B_6(1FUQ)
FUMC_ECOLI
[Raw transfer]



CIT_B_11(1FUO)
FUMC_ECOLI
[Raw transfer]



UNL_A_3(3TV2)
?
[Raw transfer]
8 PsiBlast_PDB 96.6661% -71 - C3 -3TV2 2.8 ?
28 PsiBlast_CBE 96.1058% -77 - C3 -3E04 - FUMH_HUMAN -
10 PsiBlast_PDB 95.4458% -75 - C3 -3E04 - FUMH_HUMAN -
22 PsiBlast_CBE 95.3763% -73 - C3 -1FUQ 2.8 FUMC_ECOLI
26 PsiBlast_CBE 95.2063% -74 - C3 -1FUR - FUMC_ECOLI -
2 PsiBlast_PDB 95.1363% -73 - C3 -1YFE - FUMC_ECOLI -
24 PsiBlast_CBE 94.5363% -72 - C3 -1KQ7 2.5 FUMC_ECOLI
75 HHSearch 94.2158% -73 - C3 -3E04 - FUMH_HUMAN -
9 PsiBlast_PDB 94.1558% -71 - C3 -3GTD - FUMC_RICPR -
21 PsiBlast_CBE 94.1063% -74 - C3 -1FUO 3.6 FUMC_ECOLI
7 PsiBlast_PDB 94.0063% -73 - C3 -2FUS 3.5 FUMC_ECOLI
23 PsiBlast_CBE 93.8863% -73 - C3 -1FUP 4.6 FUMC_ECOLI
1 PsiBlast_PDB 93.8563% -73 - C3 -1FUO 3.6 FUMC_ECOLI
6 PsiBlast_PDB 93.7063% -72 - C3 -1FUR - FUMC_ECOLI -
11 PsiBlast_PDB 93.5656% -75 - C3 -4HGV - FUMC_RHIME -
25 PsiBlast_CBE 93.3263% -74 - C3 -2FUS 2.7 FUMC_ECOLI
3 PsiBlast_PDB 93.2263% -73 - C3 -1FUP 4.2 FUMC_ECOLI
4 PsiBlast_PDB 93.0863% -71 - C3 -1FUQ 3.6 FUMC_ECOLI
65 Fugue 92.9062% -73 - C3 -1FUR - FUMC_ECOLI -
5 PsiBlast_PDB 92.6863% -72 - C3 -1KQ7 3.5 FUMC_ECOLI
51 PsiBlast_CBE 86.1846% -71 - C3 -3RRP 2.2 ?
50 PsiBlast_CBE 85.3846% -71 - C3 -3RRP 2.3 ?