@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1281: (2015-12-22 )
MLSVYEKGNALDKRVLEEWLLSEDILMENAAMALERAVLQNASLGAKVIILCGSGDNGGDGYTLARRLVGRFKTLVFEMKLAKSPMCQLQKERAKKVGVVIKAWEEKNEDLECDVLVDCVVGSAFKGGLEPFLDFESLSQKARFKIACDIPSGIDSKGRVDKRAFKADTTISMGAIKSCLLSDKAKDYIGELKVGHLGVFNQIYEIPTDTFLLEKSDLKLPLRDRKNAHKGDYGHAHVLLGKHSGAGLLSALSALSFGSGVVSIQALECEITSNNKPLELVFCENFPKKLSAFALGMGLENIPKDFKKWLELAPCVLDAGVFYHKEVLQALEKEVILTPHPKEFLSLLKSVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGRVFINNLGSVALAKAGSGDVLAGLIVSLLSQNYTPLDAAINASLAHALAGLEFKNHYALTPLDLIEKIKRL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(3RTE)
NNR_THEMA
[Raw transfer]



ATP_A_6(3RTC)
NNR_THEMA
[Raw transfer]



ADP_A_5(3RRE)
NNR_THEMA
[Raw transfer]



ADP_A_6(3RTD)
NNR_THEMA
[Raw transfer]



BA3_A_6(3RS9)
NNR_THEMA
[Raw transfer]



AMP_A_4(3RRB)
NNR_THEMA
[Raw transfer]



GOL_A_8(3RS8)
NNR_THEMA
[Raw transfer]



NPW_A_4(3RPZ)
NNRD_BACSU
[Raw transfer]



NPW_A_7(3RU3)
NNR_THEMA
[Raw transfer]



NAX_A_5(3RSQ)
NNR_THEMA
[Raw transfer]



EDO_A_9(2R3B)
NNRD_ENTFA
[Raw transfer]



NPW_A_5(3RU2)
NNR_THEMA
[Raw transfer]
9 PsiBlast_PDB 96.2129% -95 - C4 -3RTC 7.3 NNR_THEMA
12 PsiBlast_PDB 95.7329% -94 - C4 -3RTG - NNR_THEMA -
8 PsiBlast_PDB 95.2729% -96 - C4 -3RTA - NNR_THEMA -
15 PsiBlast_PDB 95.2429% -95 - C4 -3RRE 5.9 NNR_THEMA
4 PsiBlast_PDB 95.2329% -96 - C4 -3RSQ 3.5 NNR_THEMA
17 PsiBlast_PDB 95.1229% -95 - C4 -3RRJ - NNR_THEMA -
18 PsiBlast_PDB 95.0129% -95 - C4 -3RSG - NNR_THEMA -
10 PsiBlast_PDB 94.9229% -95 - C4 -3RTD 6.3 NNR_THEMA
5 PsiBlast_PDB 94.9229% -94 - C4 -3RSS - NNR_THEMA -
16 PsiBlast_PDB 94.7629% -95 - C4 -3RRF - NNR_THEMA -
11 PsiBlast_PDB 94.7629% -94 - C4 -3RTE 6.4 NNR_THEMA
2 PsiBlast_PDB 94.7429% -93 - C4 -3RS9 6.2 NNR_THEMA
20 PsiBlast_PDB 94.6329% -94 - C4 -3RU2 3.7 NNR_THEMA
1 PsiBlast_PDB 94.5729% -93 - C4 -3RS8 2.8 NNR_THEMA
6 PsiBlast_PDB 94.4829% -92 - C4 -3RT7 - NNR_THEMA -
7 PsiBlast_PDB 94.4429% -94 - C4 -3RT9 - NNR_THEMA -
3 PsiBlast_PDB 94.4329% -94 - C4 -3RSF - NNR_THEMA -
19 PsiBlast_PDB 94.3829% -93 - C4 -3RTB - NNR_THEMA -
13 PsiBlast_PDB 93.6629% -92 - C4 -3RU3 4.2 NNR_THEMA
14 PsiBlast_PDB 93.5329% -93 - C4 -3RRB 5.2 NNR_THEMA
38 HHSearch 68.8330% -88 - C4 -3RPZ 4.4 NNRD_BACSU