@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo0192: (2016-03-13 )
MKIRRSERLIDMTQFLLSHPRKLVPLTMFAERYGSAKSSISEDLVIIKKTFEDRGIGTLETVPGAAGGVQYISIAGNDDVLDFVHTLCNRIAEPNRLLPGGYLYLSDLLGEPVTLKAIGKILATKFNNQKIDAIMTVATKGIPIAQAVAEHLSVPFVIVRRDSKVTEGSTVSINYVSGSSKRIEKMELSKRSLAEGSNVVIVDDFMKAGGTINGMKNLLEEFNAHLVGIGVLVESEYAEERLVDDYVSLVKIKNVNMKEKQIEVVDGNYFNS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PCP_H_8(1P4A)
PURR_BACSU
[Raw transfer]




EPE_A_13(1O57)
PURR_BACSU
[Raw transfer]




EPE_D_14(1O57)
PURR_BACSU
[Raw transfer]




PCP_H_8(1P4A)
PURR_BACSU
[Raw transfer]




PCP_F_6(1P4A)
PURR_BACSU
[Raw transfer]




PCP_E_5(1P4A)
PURR_BACSU
[Raw transfer]




PCP_F_6(1P4A)
PURR_BACSU
[Raw transfer]




EPE_A_13(1O57)
PURR_BACSU
[Raw transfer]




EPE_A_13(1O57)
PURR_BACSU
[Raw transfer]




EPE_D_14(1O57)
PURR_BACSU
[Raw transfer]




23 PsiBlast_CBE 94.5263%-136 - C4 -1P4A 4.9 PURR_BACSU
25 PsiBlast_CBE 94.0563%-135 - C4 -1O57 Error PURR_BACSU
22 PsiBlast_CBE 93.6163%-135 - C4 -1P4A Error PURR_BACSU
1 PsiBlast_PDB 93.3663%-136 - C4 -1O57 - PURR_BACSU -
27 HHSearch 93.2863%-137 - C4 -1O57 2.0 PURR_BACSU
48 Fugue 93.1762%-134 - C4 -1O57 2.0 PURR_BACSU
2 PsiBlast_PDB 93.1263%-138 - C4 -1P4A Error PURR_BACSU
24 PsiBlast_CBE 93.1063%-134 - C4 -1O57 1.8 PURR_BACSU
21 PsiBlast_CBE 92.3963%-131 - C4 -1P4A 4.2 PURR_BACSU
26 PsiBlast_CBE 92.3163%-132 - C4 -1O57 Error PURR_BACSU
28 HHSearch 53.9223%-114 - C4 -1Y0B - XPT_BACSU -
8 PsiBlast_PDB 52.6828%-131 - C4 -1ZN9 - APT_HUMAN -
30 HHSearch 52.2123%-123 * C4 *2DY0 - APT_ECOLI -
5 PsiBlast_PDB 51.7428%-124 - C4 -1ORE - APT_HUMAN -
4 PsiBlast_PDB 51.4126% -98 - C4 -1Y0B - XPT_BACSU -
7 PsiBlast_PDB 51.3928%-124 - C4 -1ZN8 - APT_HUMAN -
3 PsiBlast_PDB 51.2526%-105 - C4 -2FXV - XPT_BACSU -
6 PsiBlast_PDB 50.3528%-123 - C4 -1ZN7 - APT_HUMAN -
51 Fugue 50.0121%-136 - C4 -1G2Q - APT1_YEAST -
10 PsiBlast_PDB 49.6325%-123 - C4 -4M0K - ? -