@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2847: (2016-04-08 )
MTKDIMDAVFIKEMAKTTSNLYRLGWDERNGGNITYLLDEKEVAEYLDVKQIIRTIPMDFDGKKLAGKYFLVTGSGKYFKNVEEAPAVNLGVIQVSEDGKAVHLLWGYTDGGLPTSELPAHFMSHIARLSVDPENRVVMHCHATHLLAMTFTHELTERAFTRTLWQMCTECLVVFPEGVGIIPWLVPGTNEIGEATSEKMKENRLIVWPHHGIYGAGQSMDETFGLIETAEKAAEVYTIVMSQGGIKQAITDEQLKALGERFGVEAKAGYLNN

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

13P_A_4(2V2A)
RHAD_ECOLI
[Raw transfer]



TLA_B_8(2UYV)
RHAD_ECOLI
[Raw transfer]



TLA_C_10(2UYV)
RHAD_ECOLI
[Raw transfer]



TLA_D_12(2UYV)
RHAD_ECOLI
[Raw transfer]



CIT_A_6(2V9N)
RHAD_ECOLI
[Raw transfer]



CIT_B_13(2V9N)
RHAD_ECOLI
[Raw transfer]



TLA_A_5(2V9G)
RHAD_ECOLI
[Raw transfer]



2HA_A_5(1OJR)
RHAD_ECOLI
[Raw transfer]



CIT_C_20(2V9N)
RHAD_ECOLI
[Raw transfer]



TLA_C_10(2V9G)
RHAD_ECOLI
[Raw transfer]



TLA_D_12(2V9G)
RHAD_ECOLI
[Raw transfer]



TLA_A_7(2UYV)
RHAD_ECOLI
[Raw transfer]



GOL_A_7(1OJR)
RHAD_ECOLI
[Raw transfer]



EDO_B_14(2V29)
RHAD_ECOLI
[Raw transfer]



TLA_B_8(2V9G)
RHAD_ECOLI
[Raw transfer]



EDO_A_10(2V29)
RHAD_ECOLI
[Raw transfer]
49 PsiBlast_CBE 98.4951%-109 - C4 -2V9G 2.8 RHAD_ECOLI
50 PsiBlast_CBE 98.2251%-112 - C4 -2V9G 2.8 RHAD_ECOLI
48 PsiBlast_CBE 98.1451%-107 - C4 -2V9G 4.1 RHAD_ECOLI
40 PsiBlast_CBE 98.1251%-112 - C4 -2V9N - RHAD_ECOLI -
42 PsiBlast_CBE 97.9051%-111 - C4 -2V9N 4.4 RHAD_ECOLI
3 PsiBlast_PDB 97.8951%-115 - C4 -2UYU - RHAD_ECOLI -
41 PsiBlast_CBE 97.7351%-111 - C4 -2V9N 4.3 RHAD_ECOLI
51 PsiBlast_CBE 97.6850%-111 - C4 -2V9E - RHAD_ECOLI -
43 PsiBlast_CBE 97.6851%-115 - C4 -2UYU - RHAD_ECOLI -
54 PsiBlast_CBE 97.6250%-111 - C4 -2V9M - RHAD_ECOLI -
2 PsiBlast_PDB 97.5451%-109 - C4 -1OJR 2.9 RHAD_ECOLI
4 PsiBlast_PDB 97.5151%-112 - C4 -2V9N 4.4 RHAD_ECOLI
7 PsiBlast_PDB 97.4151%-109 - C4 -2V9G 3.7 RHAD_ECOLI
46 PsiBlast_CBE 97.3751%-110 - C4 -2UYV 4.1 RHAD_ECOLI
45 PsiBlast_CBE 97.1951%-111 - C4 -2UYV 3.1 RHAD_ECOLI
21 PsiBlast_CBE 97.0851%-112 - C4 -1GT7 - RHAD_ECOLI -
1 PsiBlast_PDB 97.0551%-110 - C4 -1GT7 - RHAD_ECOLI -
6 PsiBlast_PDB 97.0251%-111 - C4 -2UYV 3.1 RHAD_ECOLI
44 PsiBlast_CBE 97.0151%-113 - C4 -2V29 3.0 RHAD_ECOLI
8 PsiBlast_PDB 97.0150%-110 - C4 -2V9E - RHAD_ECOLI -
11 PsiBlast_PDB 96.8650%-109 - C4 -2V2A 3.7 RHAD_ECOLI
5 PsiBlast_PDB 96.8051%-112 - C4 -2V29 2.9 RHAD_ECOLI
47 PsiBlast_CBE 96.1751%-110 - C4 -2UYV 4.5 RHAD_ECOLI