@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1694: (2015-12-09 )
MKKILNQPTDVVTEMLDGLAYVHNDLVHRVEGFDIIARNEEKSGKVALISGGGSGHEPSHAGFVGEGMLSAAVCGAVFTSPTPDQVLEAIKEADEGAGVFMVIKNYSGDIMNFEMAQDMAEMEGIDVASVVVDDDIAVEDSLYTQGKRGVAGTILVHKILGHAARHGKSLQEIKAIADELVPNIHTVGLALSGATVPEVGKPGFVLAEDEIEFGIGIHGEPGYRKEKMQPSKALATELVDKLIESFDAKSGEKYGVLINGMGATPLMEQYVFANDVAKLLEDKGIEVNYKKLGNYMTSIDMAGLSLTLIKLENQEWLEALNSDVTTIAW

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(2IU6)
DHAQ_LACLA
[Raw transfer]




GOL_A_3(3PNK)
DHAK_ECOLI
[Raw transfer]




GOL_B_4(2IU6)
DHAQ_LACLA
[Raw transfer]




GOL_B_6(4LRY)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(4LRY)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(4LRX)
DHAK_ECOLI
[Raw transfer]




GOL_B_6(4LRX)
DHAK_ECOLI
[Raw transfer]




GOL_B_5(1UOE)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_B_4(3PNK)
DHAK_ECOLI
[Raw transfer]




GOL_A_5(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_B_6(1OI2)
DHAK_ECOLI
[Raw transfer]




GOL_A_3(1UOE)
DHAK_ECOLI
[Raw transfer]




GOL_A_3(3PNL)
DHAK_ECOLI
[Raw transfer]




2HA_C_6(3CT4)
DHAK_LACLA
[Raw transfer]




G3H_B_6(1UOD)
DHAK_ECOLI
[Raw transfer]




2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_B_5(3CT4)
DHAK_LACLA
[Raw transfer]




2HA_A_4(3CT4)
DHAK_LACLA
[Raw transfer]




G3H_A_5(1UOD)
DHAK_ECOLI
[Raw transfer]




2HA_A_6(1UN9)
DHAK_CITFR
[Raw transfer]




2HA_B_10(1UN9)
DHAK_CITFR
[Raw transfer]




HIQ_A_7(2IU4)
DHAQ_LACLA
[Raw transfer]




HIQ_A_7(2IU4)
DHAQ_LACLA
[Raw transfer]




HIQ_B_8(2IU4)
DHAQ_LACLA
[Raw transfer]




1 PsiBlast_PDB 99.6371% -97 - C11 -3CT4 2.7 DHAK_LACLA
21 PsiBlast_CBE 99.5171% -95 - C11 -3CT4 2.5 DHAK_LACLA
22 PsiBlast_CBE 99.0971% -96 - C11 -3CT4 2.6 DHAK_LACLA
41 HHSearch 97.1269% -93 - C11 -3CT4 2.7 DHAK_LACLA
2 PsiBlast_PDB 86.6245% -90 - C11 -2IU6 2.8 DHAQ_LACLA
23 PsiBlast_CBE 86.1645% -86 - C11 -2IU6 3.1 DHAQ_LACLA
9 PsiBlast_PDB 84.6141% -84 - C11 -3PNL 2.8 DHAK_ECOLI
58 Fugue 84.5343% -86 - C11 -1OI2 2.4 DHAK_ECOLI
29 PsiBlast_CBE 84.3641% -83 - C11 -3PNK 2.4 DHAK_ECOLI
25 PsiBlast_CBE 84.2941% -85 - C11 -4LRX 3.0 DHAK_ECOLI
10 PsiBlast_PDB 84.1441% -82 - C11 -4LRY 3.1 DHAK_ECOLI
30 PsiBlast_CBE 83.9741% -85 - C11 -4LRY 3.3 DHAK_ECOLI
8 PsiBlast_PDB 83.9041% -85 - C11 -3PNK 2.9 DHAK_ECOLI
31 PsiBlast_CBE 83.7641% -87 - C11 -1UOE 2.5 DHAK_ECOLI
4 PsiBlast_PDB 83.6141% -82 - C11 -4LRX 3.5 DHAK_ECOLI
27 PsiBlast_CBE 83.5941% -88 - C11 -1OI3 - DHAK_ECOLI -
26 PsiBlast_CBE 83.5541% -88 - C11 -1UOD 3.2 DHAK_ECOLI
28 PsiBlast_CBE 82.7841% -87 - C11 -1OI2 2.5 DHAK_ECOLI
42 HHSearch 82.7343% -83 * C11 *1OI2 2.4 DHAK_ECOLI
6 PsiBlast_PDB 82.5741% -85 - C11 -1OI3 - DHAK_ECOLI -
11 PsiBlast_PDB 82.5541% -86 - C11 -1UOE 2.6 DHAK_ECOLI
7 PsiBlast_PDB 82.5041% -84 - C11 -1UOD 3.2 DHAK_ECOLI
5 PsiBlast_PDB 82.3341% -85 - C11 -1OI2 2.4 DHAK_ECOLI
16 PsiBlast_PDB 79.8237% -84 - C11 -1UN9 2.4 DHAK_CITFR
34 PsiBlast_CBE 79.6137% -84 - C11 -1UN9 2.2 DHAK_CITFR
24 PsiBlast_CBE 67.4545% -83 - C11 -2IU4 22.3 DHAQ_LACLA
3 PsiBlast_PDB 66.1545% -84 - C11 -2IU4 22.3 DHAQ_LACLA
40 HHSearch 65.3844% -83 - C11 -2IU4 22.2 DHAQ_LACLA