@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1847: (2015-12-11 )
MDKKKILVTGIVPKEGLRKLMDRFDVTYSEDRPFSRDYVLEHLSEYDGWLLMGQKGDKEMIDAGENLQIISLNAVGFDHVDTAYAKEKGIIVSNSPQAVRVPTAEMTFALILAASKRLAFYDSIVRSGEWIDPSEQRYQGLTLQGSTLGIYGMGRIGLTVANFAKAFGMTVVYNDVYRLPEDKEKELGVTYLEFDQLIKTADVITIHAPALPSTIHKFNKDVFAKMKNRSYLINAARGPIVSEEALIEALKEGEIAGAGLDVFENEPQVSEGLRSLDNVIMSPHAGTGTIEGRRTLAEEAADNIIAFFDGKPQNIVNK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NHE_E_5(2CUK)
?
[Raw transfer]



ACY_C_3(1MX3)
CTBP1_HUMAN
[Raw transfer]



GOL_A_7(2DBQ)
GYAR_PYRHO
[Raw transfer]



FMT_A_4(1HKU)
CTBP1_RAT
[Raw transfer]



FMT_A_2(3GA0)
CTBP1_RAT
[Raw transfer]
29 PsiBlast_CBE 95.1837% -96 - C1 -2DBR - GYAR_PYRHO -
28 PsiBlast_CBE 94.7237% -98 - C1 -2DBR - GYAR_PYRHO -
26 PsiBlast_CBE 94.7137% -95 - C1 -2DBR - GYAR_PYRHO -
24 PsiBlast_CBE 94.5537% -98 - C1 -2DBZ - GYAR_PYRHO -
6 PsiBlast_PDB 94.4437% -98 - C1 -2DBR - GYAR_PYRHO -
7 PsiBlast_PDB 94.2637% -95 - C1 -2DBZ - GYAR_PYRHO -
25 PsiBlast_CBE 93.4737% -98 - C1 -2DBR - GYAR_PYRHO -
38 PsiBlast_CBE 93.3136%-107 * C1 *2CUK 3.4 ?
27 PsiBlast_CBE 93.3137% -98 - C1 -2DBR - GYAR_PYRHO -
113 HHSearch 92.9737% -97 - C1 -2DBQ 2.1 GYAR_PYRHO
8 PsiBlast_PDB 92.7736% -96 - C1 -2DBQ - GYAR_PYRHO -
22 PsiBlast_CBE 92.7036%-103 - C1 -1WWK - ? -
2 PsiBlast_PDB 92.3136%-101 - C1 -1WWK - ? -
124 HHSearch 91.3836%-107 - C1 -2CUK - ? -
121 HHSearch 91.3336%-101 - C1 -1WWK - ? -
31 PsiBlast_CBE 90.7933% -97 - C1 -2WWR - GRHPR_HUMAN -
30 PsiBlast_CBE 90.5433%-102 - C1 -2WWR - GRHPR_HUMAN -
1 PsiBlast_PDB 90.3433%-105 - C1 -1GDH - DHGY_HYPME -
12 PsiBlast_PDB 89.8533%-100 - C1 -2WWR - GRHPR_HUMAN -
104 Fugue 89.7332% -98 - C1 -1YGY - SERA_MYCTU -
44 PsiBlast_CBE 76.9935% -96 - C1 -1MX3 3.8 CTBP1_HUMAN
48 PsiBlast_CBE 76.2135% -98 - C1 -3GA0 3.1 CTBP1_RAT
47 PsiBlast_CBE 75.0336% -91 - C1 -1HKU 3.8 CTBP1_RAT