@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu03900: (2016-06-06 )
MSQTTASITTAQWQQKRDQFVSKGVSNGNRSLAVKGEGAELYDLDGRRFIDFAGAIGTLNVGHSHPKVVEAVKRQAEELIHPGFNVMMYPTYIELAEKLCGIAPGSHEKKAIFLNSGAEAVENAVKIARKYTKRQGVVSFTRGFHGRTNMTMSMTSKVKPYKFGFGPFAPEVYQAPFPYYYQKPAGMSDESYDDMVIQAFNDFFIASVAPETVACVVMEPVQGEGGFIIPSKRFVQHVASFCKEHGIVFVADEIQTGFARTGTYFAIEHFDVVPDLITVSKSLAAGLPLSGVIGRAEMLDAAAPGELGGTYAGSPLGCAAALAVLDIIEEEGLNERSEEIGKIIEDKAYEWKQEFPFIGDIRRLGAMAAIEIVKDPDTREPDKTKAAAIAAYANQNGLLLLTAGINGNIIRFLTPLVISDSLLNEGLSILEAGLRA

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P00_A_13(4JEZ)
ARGD_SALTY
[Raw transfer]




P00_A_3(4JEW)
ARGD_SALTY
[Raw transfer]




P00_B_19(4JEW)
ARGD_SALTY
[Raw transfer]




P00_B_18(4JEZ)
ARGD_SALTY
[Raw transfer]




PLP_A_3(4NOG)
?
[Raw transfer]




PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]




PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]




PLP_B_5(4NOG)
?
[Raw transfer]




PLP_B_9(4JF1)
ARGD_SALTY
[Raw transfer]




PLP_A_3(4JEY)
ARGD_SALTY
[Raw transfer]




PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]




PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]




PLP_B_10(4ZWM)
?
[Raw transfer]




PLP_A_3(4ZWM)
?
[Raw transfer]




PLP_A_4(2E54)
ARGD_THEMA
[Raw transfer]




PFM_A_5(2OAT)
OAT_HUMAN
[Raw transfer]




PLP_A_3(4NOG)
?
[Raw transfer]




PLP_B_13(4JEY)
ARGD_SALTY
[Raw transfer]




PLP_C_7(1OAT)
OAT_HUMAN
[Raw transfer]




PLP_A_5(1OAT)
OAT_HUMAN
[Raw transfer]




PLP_A_5(2BYL)
OAT_HUMAN
[Raw transfer]




PLP_A_3(4ZLV)
?
[Raw transfer]




PLP_B_6(1OAT)
OAT_HUMAN
[Raw transfer]




PLP_B_7(4ZLV)
?
[Raw transfer]




PLP_B_6(2BYL)
OAT_HUMAN
[Raw transfer]




PFM_C_7(2OAT)
OAT_HUMAN
[Raw transfer]




PLP_C_7(2BYL)
OAT_HUMAN
[Raw transfer]




PFM_B_6(2OAT)
OAT_HUMAN
[Raw transfer]




PEG_B_14(5EQC)
?
[Raw transfer]




PEG_A_6(5EQC)
?
[Raw transfer]




EDO_A_5(2PB2)
ARGD_SALTY
[Raw transfer]




EDO_B_24(4JEX)
ARGD_SALTY
[Raw transfer]




EDO_A_7(4JEY)
ARGD_SALTY
[Raw transfer]




EDO_A_4(4JEX)
ARGD_SALTY
[Raw transfer]




51 PsiBlast_CBE 88.2244%-111 - C1 -4ATP - ? -
47 PsiBlast_CBE 87.2644%-110 - C1 -4ATP - ? -
10 PsiBlast_PDB 86.9244%-109 - C1 -4ATP - ? -
11 PsiBlast_PDB 86.2044%-109 - C1 -4ATQ - ? -
44 PsiBlast_CBE 86.1744%-107 - C1 -4ATQ - ? -
48 PsiBlast_CBE 86.0244%-109 - C1 -4ATP - ? -
49 PsiBlast_CBE 85.9544%-110 - C1 -4ATP - ? -
46 PsiBlast_CBE 85.7144%-109 - C1 -4ATP - ? -
45 PsiBlast_CBE 85.4344%-109 - C1 -4ATP - ? -
28 PsiBlast_CBE 85.3644%-103 - C1 -1SZU - GABT_ECOLI -
50 PsiBlast_CBE 85.2844%-109 - C1 -4ATP - ? -
30 PsiBlast_CBE 85.1944%-101 - C1 -1SZK - GABT_ECOLI -
43 PsiBlast_CBE 85.1644%-107 - C1 -4ATQ - ? -
26 PsiBlast_CBE 84.6644%-103 - C1 -1SF2 - GABT_ECOLI -
42 PsiBlast_CBE 84.5644%-105 - C1 -4ATQ - ? -
40 PsiBlast_CBE 84.3944%-107 - C1 -4ATQ - ? -
36 PsiBlast_CBE 84.3847%-104 - C1 -3Q8N - ? -
23 PsiBlast_CBE 84.3544%-104 - C1 -1SFF - GABT_ECOLI -
41 PsiBlast_CBE 84.3244%-107 - C1 -4ATQ - ? -
21 PsiBlast_CBE 83.9944%-103 - C1 -1SFF - GABT_ECOLI -
105 HHSearch 70.3232%-109 - C1 -2OAT 6.5 OAT_HUMAN
127 Fugue 69.6931%-113 - C1 -2OAT 6.4 OAT_HUMAN
114 HHSearch 69.0431%-108 * C1 *4NOG 4.9 ?
106 HHSearch 68.0731%-110 - C1 -4JF1 3.9 ARGD_SALTY
76 PsiBlast_CBE 67.6732%-114 - C1 -2BYL 3.2 OAT_HUMAN
69 PsiBlast_CBE 66.7632%-112 - C1 -1OAT 3.0 OAT_HUMAN
81 PsiBlast_CBE 66.3835%-109 - C1 -2E54 4.5 ARGD_THEMA
67 PsiBlast_CBE 66.3832%-110 - C1 -1OAT 3.0 OAT_HUMAN
66 PsiBlast_CBE 66.1832%-108 - C1 -2OAT 6.4 OAT_HUMAN
78 PsiBlast_CBE 66.0632%-111 - C1 -2BYL 2.9 OAT_HUMAN
77 PsiBlast_CBE 65.4032%-112 - C1 -2BYL 3.0 OAT_HUMAN
65 PsiBlast_CBE 65.1132%-109 - C1 -2OAT 6.7 OAT_HUMAN
64 PsiBlast_CBE 65.0232%-109 - C1 -2OAT 6.0 OAT_HUMAN
68 PsiBlast_CBE 64.9132%-111 - C1 -1OAT 3.1 OAT_HUMAN
82 PsiBlast_CBE 62.6632%-103 - C1 -4JEY 3.8 ARGD_SALTY
63 PsiBlast_CBE 61.6532%-104 - C1 -4JEW 6.0 ARGD_SALTY
89 PsiBlast_CBE 61.3132%-102 - C1 -4ZWM 4.4 ?
88 PsiBlast_CBE 61.1232% -99 - C1 -4ZWM 4.0 ?
94 PsiBlast_CBE 60.9132%-103 - C1 -4JEZ 2.2 ARGD_SALTY
79 PsiBlast_CBE 60.9032%-100 - C1 -4JF1 3.7 ARGD_SALTY
62 PsiBlast_CBE 60.5832%-100 - C1 -4JEW 4.8 ARGD_SALTY
59 PsiBlast_CBE 60.5432%-102 - C1 -2PB2 3.0 ARGD_SALTY
90 PsiBlast_CBE 60.3232% -98 - C1 -4ZLV 2.9 ?
85 PsiBlast_CBE 60.2432% -99 - C1 -5EQC 2.3 ?
58 PsiBlast_CBE 60.2032%-103 - C1 -4JEX 2.3 ARGD_SALTY
92 PsiBlast_CBE 60.0532% -97 - C1 -4NOG 4.7 ?
91 PsiBlast_CBE 60.0132% -98 - C1 -4ZLV 2.9 ?
19 PsiBlast_PDB 59.9632%-103 - C1 -4JEX 3.0 ARGD_SALTY
80 PsiBlast_CBE 59.6232%-101 - C1 -4JF1 3.9 ARGD_SALTY
84 PsiBlast_CBE 59.5832% -98 - C1 -5EQC 2.9 ?
83 PsiBlast_CBE 59.4232%-104 - C1 -4JEY 3.8 ARGD_SALTY
95 PsiBlast_CBE 59.3032%-103 - C1 -4JEZ 3.3 ARGD_SALTY
93 PsiBlast_CBE 59.1632% -98 - C1 -4NOG 4.9 ?