@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu08590: (2016-06-13 )
MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKSSYIAYFQLPDIPEASLRENDYDTLDKAIGLSDRPALFTSEDVSRYKEAWKQPGALTAMLNWYRALRKGSLAEKPSYETVPYRMIWGMEDRFLSRKLAKETERHCPNGHLIFVDEASHWINHEKPAIVNQLILEYLKNQ

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BSU_A_4(5AI5)
HYES_HUMAN
[Raw transfer]




S38_A_3(3ANS)
HYES_HUMAN
[Raw transfer]




W9L_A_3(4C4Z)
HYES_HUMAN
[Raw transfer]




S94_A_3(4X6Y)
HYES_HUMAN
[Raw transfer]




7WI_A_2(4C4Y)
HYES_HUMAN
[Raw transfer]




S82_A_3(3ANT)
HYES_HUMAN
[Raw transfer]




PO6_B_9(4O08)
?
[Raw transfer]




PO6_A_3(4O08)
?
[Raw transfer]




W9M_A_3(4C4X)
HYES_HUMAN
[Raw transfer]




DMS_A_7(5AI0)
HYES_HUMAN
[Raw transfer]




BSU_A_5(2ZJF)
?
[Raw transfer]




4VY_A_10(5AI4)
HYES_HUMAN
[Raw transfer]




4XH_A_6(5AI6)
HYES_HUMAN
[Raw transfer]




KJU_A_5(5AIB)
HYES_HUMAN
[Raw transfer]




K2T_A_6(5AI8)
HYES_HUMAN
[Raw transfer]




51 HHSearch 77.9633%-110 - C1 -4INZ - ? -
23 PsiBlast_CBE 77.0632%-108 - C1 -4INZ - ? -
3 PsiBlast_PDB 76.5032%-112 - C1 -4IO0 - ? -
4 PsiBlast_PDB 76.1532%-108 - C1 -4INZ - ? -
22 PsiBlast_CBE 75.5832%-105 - C1 -4IO0 - ? -
15 PsiBlast_PDB 75.5328%-117 - C1 -5AI5 5.9 HYES_HUMAN
16 PsiBlast_PDB 75.3028%-119 - C1 -5AI6 3.8 HYES_HUMAN
1 PsiBlast_PDB 74.7832%-107 - C- -4NZZ - ? -
21 PsiBlast_CBE 74.3132%-109 - C1 -4O08 4.2 ?
5 PsiBlast_PDB 74.0928%-119 - C1 -4C4X 3.9 HYES_HUMAN
2 PsiBlast_PDB 74.0232%-111 * C1 *4O08 4.2 ?
12 PsiBlast_PDB 73.8828%-119 - C1 -5AHX - HYES_HUMAN -
17 PsiBlast_PDB 73.8528%-120 - C1 -5AI8 3.6 HYES_HUMAN
13 PsiBlast_PDB 73.8228%-118 - C1 -5AI0 3.5 HYES_HUMAN
7 PsiBlast_PDB 73.6628%-119 - C1 -4C4Z 3.9 HYES_HUMAN
8 PsiBlast_PDB 73.2128%-120 - C1 -3ANS 6.7 HYES_HUMAN
9 PsiBlast_PDB 73.0928%-121 - C1 -3ANT 7.5 HYES_HUMAN
10 PsiBlast_PDB 72.8928%-117 - C1 -4X6X - HYES_HUMAN -
11 PsiBlast_PDB 72.7928%-116 - C1 -4X6Y 5.8 HYES_HUMAN
18 PsiBlast_PDB 72.2928%-117 - C1 -5AI9 - HYES_HUMAN -
24 PsiBlast_CBE 47.9744%-160 - C1 -2ZJF 2.8 ?