@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu21630: (2016-07-03 )
MKKIVESTTFPRTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQSVELSDPKEWGNPPVPEEWWDIIRESMPAYNSNYTPTTRGMGQIVELFRSYPEVKRSNHPNYSFVAWGKHKNKILNQHPLEFGLGEQSPLGKLYIRESYVLLLGADFDSSTCFHLAEYRIPYQKIINRGAPIIVEGKRVWKEYKELEFREELFQEVGQAFEAEHNMKVGKVGSANCRLFSLTEAVDFAEKWFINNDSKNIKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACO_A_3(3IJW)
?
[Raw transfer]




ACO_A_3(3IJW)
?
[Raw transfer]




ACO_A_6(3SLF)
?
[Raw transfer]




ACO_A_5(3KZL)
?
[Raw transfer]




ACO_A_5(3N0S)
?
[Raw transfer]




ACO_A_5(3SLB)
?
[Raw transfer]




ACO_B_6(3SMA)
?
[Raw transfer]




ACO_A_3(3N0M)
?
[Raw transfer]




ACO_D_8(3SMA)
?
[Raw transfer]




ACO_C_7(3SMA)
?
[Raw transfer]




ACO_A_5(3SMA)
?
[Raw transfer]




ACO_A_5(3SMA)
?
[Raw transfer]




CIT_A_4(3E4F)
?
[Raw transfer]




20 PsiBlast_CBE 83.9399%-106 - C2 -2NYG - YOKD_BACSU -
40 HHSearch 83.40100%-106 - C2 -2NYG - YOKD_BACSU -
19 PsiBlast_CBE 83.4099%-111 - C2 -2NYG - YOKD_BACSU -
30 Fugue 83.2699%-107 - C2 -2NYG - YOKD_BACSU -
1 PsiBlast_PDB 83.2699%-107 - C2 -2NYG - YOKD_BACSU -
18 PsiBlast_CBE 83.1899%-111 - C2 -2NYG - YOKD_BACSU -
21 PsiBlast_CBE 80.4899%-110 - C2 -2NYG - YOKD_BACSU -
42 HHSearch 71.7454%-103 * C2 *3IJW 8.7 ?
3 PsiBlast_PDB 71.4953%-106 - C2 -3SLF 8.6 ?
8 PsiBlast_PDB 71.0852%-109 - C2 -3SLB 7.7 ?
4 PsiBlast_PDB 70.9953%-107 - C2 -3E4F 4.5 ?
7 PsiBlast_PDB 70.9852%-103 - C2 -3N0M 7.7 ?
2 PsiBlast_PDB 70.9153%-104 - C2 -3IJW 8.5 ?
6 PsiBlast_PDB 70.3752%-107 - C2 -3KZL 8.4 ?
5 PsiBlast_PDB 69.4452%-105 - C2 -3N0S 8.9 ?
24 PsiBlast_CBE 65.4444% -89 - C2 -3SMA 8.8 ?
22 PsiBlast_CBE 65.3344% -92 - C2 -3SMA 9.0 ?
9 PsiBlast_PDB 65.2144% -91 - C2 -3SMA 8.9 ?
23 PsiBlast_CBE 64.6344% -92 - C2 -3SMA 9.2 ?
41 HHSearch 64.0943% -91 - C2 -3SMA 9.0 ?