@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu23380: (2016-07-06 )
MFLHGTSRQNQHGHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNIRPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVKLDLPFKTGVKQ

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLP_A_2(2YXX)
DCDA_THEMA
[Raw transfer]




PLP_A_2(2YXX)
DCDA_THEMA
[Raw transfer]




PLP_A_2(3C5Q)
DCDA_HELPX
[Raw transfer]




LYS_B_4(1HKV)
DCDA_MYCTU
[Raw transfer]




PLP_B_6(1HKV)
DCDA_MYCTU
[Raw transfer]




PLP_A_2(2QGH)
DCDA_HELPX
[Raw transfer]




PLP_A_2(2QGH)
DCDA_HELPX
[Raw transfer]




LYS_A_3(3C5Q)
DCDA_HELPX
[Raw transfer]




PLP_A_2(1KO0)
DCDA_ECOLI
[Raw transfer]




PLP_A_5(1KNW)
DCDA_ECOLI
[Raw transfer]




PLP_A_5(1KNW)
DCDA_ECOLI
[Raw transfer]




AZ1_C_3(1TUF)
DCDA_METJA
[Raw transfer]




MES_A_6(1KNW)
DCDA_ECOLI
[Raw transfer]




XAP_A_3(2ON3)
DCOR_HUMAN
[Raw transfer]




2 PsiBlast_PDB 84.6842% -69 - C1 -2O0T - DCDA_MYCTU -
22 PsiBlast_CBE 84.3842% -72 - C1 -2O0T - DCDA_MYCTU -
83 HHSearch 84.0038%-124 - C1 -2P3E - DCDA_AQUAE -
3 PsiBlast_PDB 83.4042% -72 - C1 -1HKW - DCDA_MYCTU -
21 PsiBlast_CBE 83.0642% -68 - C1 -1HKV 3.9 DCDA_MYCTU
1 PsiBlast_PDB 82.6942% -69 - C1 -1HKV - DCDA_MYCTU -
68 HHSearch 82.6544% -46 - C1 -2O0T - DCDA_MYCTU -
73 HHSearch 78.6232%-110 - C1 -3N2B - DCDA_VIBCH -
25 PsiBlast_CBE 74.7639% 9 - C1 -1TWI - DCDA_METJA -
81 HHSearch 74.7532%-106 - C1 -2QGH 8.4 DCDA_HELPX
70 HHSearch 74.5537%-108 - C1 -2YXX 3.3 DCDA_THEMA
5 PsiBlast_PDB 74.0638% 11 - C1 -1TUF 2.3 DCDA_METJA
6 PsiBlast_PDB 73.9738% -85 - C1 -2P3E - DCDA_AQUAE -
7 PsiBlast_PDB 73.6035%-109 - C1 -2YXX 3.3 DCDA_THEMA
72 HHSearch 73.5427% -92 - C1 -2J66 - BTRK_BACCI -
4 PsiBlast_PDB 73.3439% 9 - C1 -1TWI - DCDA_METJA -
8 PsiBlast_PDB 73.3033% -95 - C1 -3N2B - DCDA_VIBCH -
24 PsiBlast_CBE 72.8339% 8 - C1 -1TWI - DCDA_METJA -
23 PsiBlast_CBE 72.4739% 8 - C1 -1TWI - DCDA_METJA -
28 PsiBlast_CBE 72.2233%-102 - C1 -3N2B - DCDA_VIBCH -
9 PsiBlast_PDB 70.2133% -45 - C1 -2QGH 8.4 DCDA_HELPX
10 PsiBlast_PDB 68.2333% -43 - C1 -3C5Q 5.0 DCDA_HELPX
76 HHSearch 63.6532% -23 - C1 -1KNW 4.6 DCDA_ECOLI
13 PsiBlast_PDB 63.2233% -9 - C1 -1KO0 3.0 DCDA_ECOLI
12 PsiBlast_PDB 61.8533% -8 - C1 -1KNW 4.9 DCDA_ECOLI