@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29140: (2016-07-16 )
MTATRGLEGVVATTSSVSSIIDDTLTYVGYDIDDLTENASFEEIIYLLWHLRLPNKKELEELKQQLAKEAAVPQEIIEHFKSYSLENVHPMAALRTAISLLGLLDSEADTMNPEANYRKAIRLQAKVPGLVAAFSRIRKGLEPVEPREDYGIAENFLYTLNGEEPSPIEVEAFNKALILHADHELNASTFTARVCVATLSDIYSGITAAIGALKGPLHGGANEGVMKMLTEIGEVENAEPYIRAKLEKKEKIMGFGHRVYKHGDPRAKHLKEMSKRLTNLTGESKWYEMSIRIEDIVTSEKKLPPNVDFYSASVYHSLGIDHDLFTPIFAVSRMSGWLAHILEQYDNNRLIRPRADYTGPDKQKFVPIEERA

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMX_E_5(1CSH)
?
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_D_4(1AJ8)
CISY_PYRFU
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



CIT_E_5(1AJ8)
CISY_PYRFU
[Raw transfer]



CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]



FLC_A_3(2P2W)
?
[Raw transfer]



FLC_A_3(2P2W)
?
[Raw transfer]
92 HHSearch 87.3045% -25 - C7 -1AJ8 7.0 CISY_PYRFU
31 PsiBlast_CBE 86.9044% -23 - C7 -1AJ8 7.9 CISY_PYRFU
4 PsiBlast_PDB 86.9044% -25 - C7 -1AJ8 7.1 CISY_PYRFU
103 HHSearch 86.0544% 7 - C7 -2IBP - ? -
93 HHSearch 85.3249% 12 - C7 -1IOM 3.1 ?
96 HHSearch 85.2645% 7 - C7 -1VGP - ? -
24 PsiBlast_CBE 85.0443% -4 - C7 -3HWK - PRPC_MYCTU -
104 HHSearch 85.0143% -4 * C7 *3HWK - PRPC_MYCTU -
3 PsiBlast_PDB 84.8843% -4 - C7 -3HWK - PRPC_MYCTU -
1 PsiBlast_PDB 84.8148% 11 - C7 -1IOM 3.1 ?
30 PsiBlast_CBE 84.5843% -5 - C7 -3HWK - PRPC_MYCTU -
6 PsiBlast_PDB 84.5841% 8 - C7 -2IBP - ? -
95 HHSearch 84.4243% -27 - C7 -3TQG - ? -
2 PsiBlast_PDB 84.2548% 3 - C7 -1IXE - ? -
82 Fugue 84.1145% 9 - C7 -1AJ8 7.0 CISY_PYRFU
29 PsiBlast_CBE 84.0643% -2 - C7 -3HWK - PRPC_MYCTU -
25 PsiBlast_CBE 83.9343% -3 - C7 -3HWK - PRPC_MYCTU -
32 PsiBlast_CBE 83.9041% 10 - C7 -2IBP - ? -
22 PsiBlast_CBE 83.8948% -7 - C7 -1IXE - ? -
23 PsiBlast_CBE 83.8748% -1 - C7 -1IXE - ? -
9 PsiBlast_PDB 82.7942% 6 - C7 -1VGM 2.2 ?
106 HHSearch 82.5442% 3 - C7 -1VGM 2.2 ?
107 HHSearch 81.4741% 26 - C7 -1A59 7.4 PRPC_ABDS2
7 PsiBlast_PDB 81.1540% 24 - C7 -1A59 7.4 PRPC_ABDS2
97 HHSearch 80.9441% -2 - C7 -2P2W 3.8 ?
11 PsiBlast_PDB 77.9640% 10 - C7 -2P2W 3.8 ?