@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30200: (2016-07-19 )
MRGFFVTGTDTEVGKTVISSGLAALLKEHNRDVGVYKPFLSGISRHHPDSDTSLLKDMSQTSLSHEDITPFAFKAPLAPYVAGKLEGKTVTMEEVLSHWGRIREKHECFIVEGAGGISVPLGEDYLVSHVIKALQLPMIIVARPHLGTINHTFLTVKYAESMGLPIAGIIINGISDSPDEDEKTNPEMIERLCGVPILGVTPKLANVTKETVLHMVKDHINLSLLMNQMGV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_E_5(1DAG)
BIOD1_ECOLI
[Raw transfer]




ATP_A_4(1A82)
BIOD1_ECOLI
[Raw transfer]




ACP_A_4(1DAH)
BIOD1_ECOLI
[Raw transfer]




ADP_A_6(1DAK)
BIOD1_ECOLI
[Raw transfer]




ADP_A_4(1BS1)
BIOD1_ECOLI
[Raw transfer]




ADP_A_4(1DAF)
BIOD1_ECOLI
[Raw transfer]




ADP_C_3(1DAD)
BIOD1_ECOLI
[Raw transfer]




ADP_A_5(1DAM)
BIOD1_ECOLI
[Raw transfer]




DSD_C_3(1DAI)
BIOD1_ECOLI
[Raw transfer]




IKT_C_3(1DAE)
BIOD1_ECOLI
[Raw transfer]




EDO_A_16(3QXC)
BIOD_HELPY
[Raw transfer]




7 PsiBlast_PDB 87.7031% -30 - C1 -1DAD 6.3 BIOD1_ECOLI
9 PsiBlast_PDB 86.8031% -30 - C1 -1DAF 7.3 BIOD1_ECOLI
11 PsiBlast_PDB 86.4531% -30 - C1 -1DAH 7.6 BIOD1_ECOLI
10 PsiBlast_PDB 86.1831% -29 - C1 -1DAG 7.8 BIOD1_ECOLI
13 PsiBlast_PDB 85.5531% -31 - C1 -1DBS - BIOD1_ECOLI -
8 PsiBlast_PDB 85.5131% -31 - C1 -1DAE 3.2 BIOD1_ECOLI
12 PsiBlast_PDB 85.4531% -33 - C1 -1DAI 3.1 BIOD1_ECOLI
6 PsiBlast_PDB 85.3531% -34 - C- -1BYI - BIOD1_ECOLI -
1 PsiBlast_PDB 84.8031% -31 - C- -1DTS - BIOD1_ECOLI -
2 PsiBlast_PDB 84.5331% -27 - C1 -1DAM 6.7 BIOD1_ECOLI
4 PsiBlast_PDB 84.4731% -29 - C1 -1DAK 7.5 BIOD1_ECOLI
3 PsiBlast_PDB 84.3531% -28 - C1 -1BS1 6.8 BIOD1_ECOLI
5 PsiBlast_PDB 84.0231% -28 - C1 -1A82 8.3 BIOD1_ECOLI
24 HHSearch 79.1331% -25 - C- -1BYI - BIOD1_ECOLI -
27 HHSearch 78.6327% -68 - C1 -3FGN - BIOD_MYCTU -
23 HHSearch 73.7328% -27 - C1 -3OF5 - BIOD_FRATT -
14 PsiBlast_PDB 71.9129% -23 - C1 -3OF5 - BIOD_FRATT -
25 HHSearch 64.8722% -10 - C1 -3QXC 3.0 BIOD_HELPY
33 HHSearch 55.2817% -41 - C1 -3EA0 - ? -
26 HHSearch 54.7616% -8 - C1 -1G3Q - ? -