@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30760: (2016-07-20 )
MFPVELDNVTVAYHKKPVLQDISLQVPEGKLIGIIGPNGAGKSTLIKTILGLVPRASGDISIYGKDYKDQRTRIGYVPQRGSVDWDFPTSPLDVVLMGRYGRIGLLKRPKKADVEMAKAALTKVGMHDYAKRQISQLSGGQQQRVFLARALCQNADIYFMDEPFAGVDAATERAIMTLLAELKEKGKTVLVVHHDLQTAEDYFDWILLLHLRKIAFGPTENVFTIENLQKTYGGRLTFLKDKVLAEGHKE

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ADP_A_3(4P31)
LPTB_ECOLI
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_6(3BK7)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_B_3(3J15)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]




56 PsiBlast_CBE 81.6533% -29 - C1 -3FVQ - FBPC_NEIG1 -
5 PsiBlast_PDB 81.0930% -36 - C1 -4WBS - ? -
78 HHSearch 80.5729% -65 - C1 -3RLF - MALK_ECOLI -
57 PsiBlast_CBE 80.1633% -25 - C1 -3FVQ - FBPC_NEIG1 -
52 PsiBlast_CBE 78.4031% -78 - C1 -3NHB - -
35 PsiBlast_CBE 75.4732% -64 - C1 -4HLU 5.9 ECFA1_THEMA
7 PsiBlast_PDB 75.0632% -48 - C1 -4U02 - ? -
53 PsiBlast_CBE 74.4231% -72 - C1 -3NHA - -
55 PsiBlast_CBE 74.2731% -44 - C1 -3NH6 - -
25 PsiBlast_CBE 74.2332% -50 - C1 -4U02 - ? -
24 PsiBlast_CBE 74.0932% -56 - C1 -4U02 - ? -
82 HHSearch 74.0430% -21 - C1 -4HUQ - ECFA2_LACBA -
6 PsiBlast_PDB 72.5232% -49 - C1 -4U00 4.1 ?
23 PsiBlast_CBE 72.2632% -48 - C1 -4U02 - ? -
1 PsiBlast_PDB 71.3132% -26 - C1 -2NQ2 - Y1470_HAEIN -
54 PsiBlast_CBE 70.3131% -47 - C1 -3NH9 - -
77 HHSearch 69.8729% -22 - C1 -3FVQ - FBPC_NEIG1 -
21 PsiBlast_CBE 69.8733% -54 - C1 -1Z47 - ? -
22 PsiBlast_CBE 69.8532% -18 - C1 -4G1U - HMUV_YERPE -
4 PsiBlast_PDB 68.9732% -17 - C1 -4G1U - HMUV_YERPE -
65 PsiBlast_CBE 68.2333% -30 - C1 -1B0U 5.8 HISP_SALTY
18 PsiBlast_PDB 67.3430% -39 - C1 -4P31 6.3 LPTB_ECOLI
51 PsiBlast_CBE 63.4131% -23 - C1 -2OLJ 4.2 ?
29 PsiBlast_CBE 62.1431% -28 - C1 -4YMU 4.4 ?
49 PsiBlast_CBE 61.4531% -35 - C1 -2OLK 4.2 ?
16 PsiBlast_PDB 60.7931% -24 - C1 -4YMV 4.0 ?
15 PsiBlast_PDB 60.6931% -26 - C1 -4YMU 4.8 ?
28 PsiBlast_CBE 59.6031% -28 - C1 -4YMV 3.6 ?
39 PsiBlast_CBE 59.4031% -25 - C1 -3C4J 4.7 ?
37 PsiBlast_CBE 58.8531% -32 - C1 -3C41 4.6 ?
38 PsiBlast_CBE 58.6231% -29 - C1 -3C4J 3.7 ?
48 PsiBlast_CBE 57.8831% -32 - C1 -2OLK 4.4 ?
36 PsiBlast_CBE 57.8131% -40 - C1 -3C41 3.8 ?
46 PsiBlast_CBE 56.8231% -28 - C1 -2OLK 4.4 ?
40 PsiBlast_CBE 56.4131% -33 - C1 -2Q0H 4.5 ?
47 PsiBlast_CBE 56.0031% -33 - C1 -2OLK 4.6 ?
50 PsiBlast_CBE 55.5931% -24 - C1 -2OLJ 3.8 ?
41 PsiBlast_CBE 55.2131% -28 - C1 -2Q0H 3.5 ?
63 PsiBlast_CBE 31.3132% 6 - C1 -3BK7 3.9 ?
62 PsiBlast_CBE 27.7032% -0 - C1 -3J15 4.0 ?