@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu32940: (2016-07-25 )
MGMSAISTETLSLGYGDAVIIDELNLTIPKGEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLEGRAIAKLPTKEVAKELAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAVERALKATKLEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILDLLFELNEKEDRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVITCDLVQNVFSMNCQVTQDPLFGTPLCIPHGRGRCIVQEAAFTSHG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMV)
?
[Raw transfer]




ANP_C_9(4R9U)
BTUD_ECOLI
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ANP_D_11(4R9U)
BTUD_ECOLI
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_A_6(3BK7)
?
[Raw transfer]




ADP_B_3(3J15)
?
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




21 PsiBlast_CBE 87.1132% -61 - C1 -4G1U - HMUV_YERPE -
1 PsiBlast_PDB 87.0932% -62 - C1 -4G1U - HMUV_YERPE -
61 HHSearch 78.9728%-136 - C1 -3RLF - MALK_ECOLI -
7 PsiBlast_PDB 77.6332% -60 - C1 -4U02 - ? -
23 PsiBlast_CBE 75.2332% -60 - C1 -4U02 - ? -
6 PsiBlast_PDB 74.6032% -57 - C1 -4U00 - ? -
19 PsiBlast_PDB 74.1229% -73 - C1 -3RLF - MALK_ECOLI -
24 PsiBlast_CBE 73.7232% -60 - C1 -4U02 - ? -
22 PsiBlast_CBE 73.2132% -51 - C1 -4U02 - ? -
16 PsiBlast_PDB 71.8129% -72 - C1 -3PUV - MALK_ECOLI -
33 PsiBlast_CBE 71.6731% -21 - C1 -3FVQ - FBPC_NEIG1 -
34 PsiBlast_CBE 71.5131% -21 - C1 -3FVQ - FBPC_NEIG1 -
13 PsiBlast_PDB 71.2429% -68 - C1 -3PUY - MALK_ECOLI -
58 HHSearch 70.9828%-123 - C1 -1V43 - ? -
18 PsiBlast_PDB 70.7229% -68 - C1 -3PUX - MALK_ECOLI -
17 PsiBlast_PDB 70.3229% -72 - C1 -3PUW - MALK_ECOLI -
57 HHSearch 69.7928%-119 - C1 -2IT1 - ? -
14 PsiBlast_PDB 69.3029% -74 - C1 -3PUZ - MALK_ECOLI -
56 HHSearch 68.3530% -32 - C1 -3FVQ - FBPC_NEIG1 -
20 PsiBlast_PDB 68.1129% -69 - C1 -4JBW - MALK_ECOLI -
47 PsiBlast_CBE 65.2032% -35 - C1 -1B0U 6.0 HISP_SALTY
28 PsiBlast_CBE 60.9932% -18 - C1 -4YMU 5.3 ?
26 PsiBlast_CBE 60.9132% -21 - C1 -4YMV 5.4 ?
39 PsiBlast_CBE 59.8431% -33 - C1 -4R9U 3.4 BTUD_ECOLI
27 PsiBlast_CBE 59.5932% -15 - C1 -4YMU 5.0 ?
40 PsiBlast_CBE 59.3031% -34 - C1 -4R9U 4.2 BTUD_ECOLI
25 PsiBlast_CBE 58.2032% -13 - C1 -4YMV 4.1 ?
31 PsiBlast_CBE 57.5831% -0 - C1 -3TIF 3.8 Y796_METJA
45 PsiBlast_CBE 40.6832%-124 - C1 -3J15 4.0 ?
46 PsiBlast_CBE 27.8032% -25 - C1 -3BK7 3.9 ?