@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34120: (2016-07-27 )
MKSKVKMFFAAAIVWSACSSTGYAAAIEKEKHVSELRAEDLFVKKVEGMNKDFIKGADVSSVIALENSGVTFYNTNGKRQDIFTTLKQAGVNYVRVRIWNHPYDSNGNGYGGGNNDVQKAIEIGKRATANGMKVLADFHYSDFWADPAKQKVPKAWANLSFEAKKAKLYEYTKQSLQKMIKEGVDIGMVQVGNETTGGFAGETDWTKMCQLFNEGSRAVRETNSNILVALHFTNPETAGRYSFIAETLSKNKVDYDVFASSYYPFWHGTLQNLTSVLKAVANTYGKKVMVAETSYTYTAEDGDGHGNTAPKSGQTLPYPISVQGQATAVRDVMEAVANTGKAGLGVFYWEPAWIPVGPKTQIEKNKVLWETYGSGWASSYAAEYDPEDAGKWYGGSAVDNQALFDFNGHPLPSLQVFQYAESGHIPKKR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B4G_A_4(2CCR)
GANA_BACLD
[Raw transfer]




B4G_B_9(2CCR)
GANA_BACLD
[Raw transfer]




B4G_A_4(1UR0)
GANA_BACLD
[Raw transfer]




B4G_A_4(2J74)
GANA_BACLD
[Raw transfer]




B4G_B_7(2J74)
GANA_BACLD
[Raw transfer]




SUGAR_B_3(2GFT)
GANA_BACLD
[Raw transfer]

-

SUGAR_A_4(2GFT)
GANA_BACLD
[Raw transfer]

-

B4G_B_8(1UR0)
GANA_BACLD
[Raw transfer]




B2G_A_5(1UR4)
GANA_BACLD
[Raw transfer]




B2G_B_9(1UR4)
GANA_BACLD
[Raw transfer]




B2G_A_5(1UR4)
GANA_BACLD
[Raw transfer]




B2G_A_5(1UR4)
GANA_BACLD
[Raw transfer]




GOL_A_25(4BF7)
GANA_EMENI
[Raw transfer]




B2G_A_5(2J74)
GANA_BACLD
[Raw transfer]




25 PsiBlast_CBE 98.9680% -64 - C6 -1R8L - GANA_BACLD -
26 PsiBlast_CBE 98.8979% -62 - C6 -2GFT 5.8 GANA_BACLD
1 PsiBlast_PDB 98.8280% -65 - C6 -1R8L - GANA_BACLD -
24 PsiBlast_CBE 98.6280% -62 - C6 -1UR0 5.0 GANA_BACLD
22 PsiBlast_CBE 98.5580% -62 - C6 -2CCR 5.7 GANA_BACLD
5 PsiBlast_PDB 98.4980% -61 - C6 -2J74 5.3 GANA_BACLD
6 PsiBlast_PDB 98.4479% -60 - C6 -2GFT 6.2 GANA_BACLD
21 PsiBlast_CBE 98.4080% -61 - C6 -2J74 5.0 GANA_BACLD
2 PsiBlast_PDB 98.3180% -62 - C6 -1UR0 5.7 GANA_BACLD
4 PsiBlast_PDB 98.1880% -62 - C6 -2CCR 5.5 GANA_BACLD
23 PsiBlast_CBE 98.1480% -61 - C6 -1UR4 4.4 GANA_BACLD
33 HHSearch 97.6679% -59 - C6 -1UR4 4.5 GANA_BACLD
53 Fugue 97.5879% -59 - C6 -1UR4 4.2 GANA_BACLD
3 PsiBlast_PDB 97.4580% -59 - C6 -1UR4 4.2 GANA_BACLD
34 HHSearch 68.0634% -13 - C6 -1HJS - GANA_THIHE -
54 Fugue 67.5934% -7 * C6 *1HJS - GANA_THIHE -
35 HHSearch 64.3632% -15 - C6 -1FOB - GANA_ASPAC -
8 PsiBlast_PDB 63.7632% -17 - C6 -1FOB - GANA_ASPAC -
7 PsiBlast_PDB 63.3132% -17 - C6 -1FHL - GANA_ASPAC -
55 Fugue 63.2631% -6 - C6 -1FOB - GANA_ASPAC -