@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34560: (2016-07-28 )
MSEWWKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSAWTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDVIGSISKYTDFPDYETDHSRSYIVGRYHSNGPRLHEFIQEMNREVLSHYDCMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNGKWQIKPFDLIALKKTMTRWQTGLMNVGWNTLYFENHDQPRVISRWGNDRKLRKECAKAFATVLHGMKGTPFIYQGEEIGMVNSDMPLEMYDDLEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHARTPMQWDAGKHAGFTAGDPWIPVNSRYQDINVKESLEDQDSIFFYYQKLIQLRKQYKIMIYGDYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEKALFEAPPELIHERWKVLISNYPQERADLKSISLKPYEAVMGISI

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_4(4H8U)
?
[Raw transfer]



SUC_A_3(2PWE)
?
[Raw transfer]



SUC_B_4(2PWE)
?
[Raw transfer]



SUC_A_4(4HPH)
?
[Raw transfer]



SUC_A_4(4HPH)
?
[Raw transfer]



TEU_B_6(4H8V)
?
[Raw transfer]



ISL_A_4(4HA1)
?
[Raw transfer]



SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]
-
TEU_A_4(4H8V)
?
[Raw transfer]



GLC_A_4(4H7V)
?
[Raw transfer]



GLC_B_6(4H7V)
?
[Raw transfer]



GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]



TEU_B_6(4H8U)
?
[Raw transfer]



MAL_A_7(3WY4)
?
[Raw transfer]



GLC_A_4(4HOZ)
?
[Raw transfer]



GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]



BGC_A_6(3WY3)
?
[Raw transfer]



BGC_B_10(3WY3)
?
[Raw transfer]



GOL_A_3(4MAZ)
O16G1_BACSU
[Raw transfer]



GOL_A_3(4M8U)
O16G1_BACSU
[Raw transfer]



GLO_A_3(4M56)
O16G1_BACSU
[Raw transfer]



NOJ_A_11(3GBE)
?
[Raw transfer]



NOJ_A_5(2PWD)
?
[Raw transfer]



NOJ_B_6(2PWD)
?
[Raw transfer]



CTS_B_6(2PWG)
?
[Raw transfer]



GLC_A_4(4HP5)
?
[Raw transfer]



GLC_B_6(4HA1)
?
[Raw transfer]



CTS_A_5(2PWG)
?
[Raw transfer]



TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]



GOL_B_12(4GIA)
?
[Raw transfer]



TRS_B_6(1ZJB)
?
[Raw transfer]



GOL_B_8(4GI9)
?
[Raw transfer]



TRS_B_6(4GO8)
?
[Raw transfer]



GOL_A_5(4AIE)
?
[Raw transfer]



GOL_B_15(4GI8)
?
[Raw transfer]



TRS_B_6(1ZJA)
?
[Raw transfer]



GOL_A_5(4GI6)
?
[Raw transfer]



GOL_A_3(4GIN)
?
[Raw transfer]



TRS_A_5(1ZJB)
?
[Raw transfer]



GOL_B_7(4H8H)
?
[Raw transfer]



BGC_A_8(3WY2)
?
[Raw transfer]



TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]



GOL_A_5(4AIE)
?
[Raw transfer]



TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]



TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]



GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]



BGC_A_2(4WLC)
DEXB_STRMU
[Raw transfer]



BGC_A_8(3WY2)
?
[Raw transfer]



GOL_A_3(4HOW)
?
[Raw transfer]



TRS_A_4(4GO8)
?
[Raw transfer]



TRS_B_6(4GO9)
?
[Raw transfer]



GOL_B_11(3WY2)
?
[Raw transfer]



TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]



TRS_A_4(4GO9)
?
[Raw transfer]



TRS_A_5(1ZJA)
?
[Raw transfer]



TRS_A_2(4HOX)
?
[Raw transfer]



TRS_A_5(1ZJA)
?
[Raw transfer]



GOL_A_7(4H2C)
?
[Raw transfer]



PRU_B_7(3WY1)
?
[Raw transfer]



EDO_A_4(3GBD)
?
[Raw transfer]



GLC_A_3(3AXH)
MALX3_YEAST
[Raw transfer]



PRU_A_5(3WY1)
?
[Raw transfer]



EDO_A_2(3GBD)
?
[Raw transfer]



TRS_B_9(4GI6)
?
[Raw transfer]



TRS_A_4(4GI9)
?
[Raw transfer]



TRS_A_4(4GIA)
?
[Raw transfer]



TRS_A_11(4GI8)
?
[Raw transfer]
4 PsiBlast_PDB 91.3199% -51 - C1 -4M8U 3.6 O16G1_BACSU
2 PsiBlast_PDB 89.7099% -49 - C1 -4MAZ 4.4 O16G1_BACSU
106 HHSearch 89.52100% -51 - C1 -4MB1 3.4 O16G1_BACSU
3 PsiBlast_PDB 89.3099% -51 - C1 -4MB1 3.4 O16G1_BACSU
1 PsiBlast_PDB 88.97100% -51 - C1 -4M56 2.5 O16G1_BACSU
21 PsiBlast_CBE 87.99100% -51 - C1 -4M56 2.8 O16G1_BACSU
68 PsiBlast_CBE 68.7443% -25 - C1 -4H7V 3.4 ?
29 PsiBlast_CBE 68.4849% -12 - C1 -5BRP - ? -
50 PsiBlast_CBE 68.4244% -24 - C1 -4GIA 2.9 ?
19 PsiBlast_PDB 68.3643% -13 - C1 -3GBD 2.9 ?
34 PsiBlast_CBE 68.2844% -20 - C1 -2PWD 4.0 ?
8 PsiBlast_PDB 68.2449% -12 - C1 -5BRP - ? -
30 PsiBlast_CBE 68.2244% -24 - C1 -4GIN 2.9 ?
49 PsiBlast_CBE 68.1844% -22 - C1 -4GO9 4.4 ?
5 PsiBlast_PDB 68.1657% 2 - C1 -1UOK - O16G_BACCE -
62 PsiBlast_CBE 68.1444% -21 - C1 -2PWF - ? -
39 PsiBlast_CBE 68.0344% -21 - C1 -2PWH - ? -
35 PsiBlast_CBE 67.9444% -22 - C1 -1ZJB 4.3 ?
61 PsiBlast_CBE 67.9344% -22 - C1 -2PWF - ? -
36 PsiBlast_CBE 67.9344% -21 - C1 -1ZJB 4.3 ?
48 PsiBlast_CBE 67.9044% -21 - C1 -4GO9 3.0 ?
69 PsiBlast_CBE 67.8043% -23 - C1 -4H7V 4.8 ?
52 PsiBlast_CBE 67.7644% -22 - C1 -4GI9 2.9 ?
41 PsiBlast_CBE 67.5744% -21 - C1 -2PWG 3.2 ?
33 PsiBlast_CBE 67.5444% -22 - C1 -2PWD 4.0 ?
115 HHSearch 67.5051% -16 - C1 -4AIE 2.6 ?
53 PsiBlast_CBE 67.4944% -20 - C1 -4GI9 2.8 ?
58 PsiBlast_CBE 67.4543% -22 - C1 -4H8H 2.3 ?
55 PsiBlast_CBE 67.4044% -21 - C1 -4GI8 3.1 ?
42 PsiBlast_CBE 67.3244% -18 - C1 -2PWG 4.4 ?
45 PsiBlast_CBE 67.2944% -21 - C1 -4GO8 4.3 ?
32 PsiBlast_CBE 67.2844% -23 - C1 -4H8V 4.2 ?
54 PsiBlast_CBE 67.1844% -19 - C1 -4GI8 3.0 ?
57 PsiBlast_CBE 67.1144% -21 - C1 -4GI6 2.6 ?
51 PsiBlast_CBE 67.0844% -21 - C1 -4GIA 2.5 ?
43 PsiBlast_CBE 67.0044% -23 - C1 -4H2C 2.6 ?
37 PsiBlast_CBE 66.9944% -22 - C1 -1ZJA 4.4 ?
44 PsiBlast_CBE 66.9244% -19 - C1 -4GO8 4.3 ?
64 PsiBlast_CBE 66.8943% -23 - C1 -4HA1 4.2 ?
16 PsiBlast_PDB 66.7845% -16 - C1 -4HPH 4.2 ?
56 PsiBlast_CBE 66.7544% -18 - C1 -4GI6 2.9 ?
31 PsiBlast_CBE 66.5544% -21 - C1 -4H8V 3.9 ?
66 PsiBlast_CBE 66.4143% -22 - C1 -4H8U 4.5 ?
17 PsiBlast_PDB 66.3345% -18 - C1 -4HP5 4.9 ?
47 PsiBlast_CBE 66.1944% -20 - C1 -2PWE 3.7 ?
20 PsiBlast_PDB 66.1543% -10 - C1 -3GBE 3.4 ?
46 PsiBlast_CBE 65.9844% -23 - C1 -2PWE 3.7 ?
14 PsiBlast_PDB 65.8845% -17 - C1 -4HOW 3.0 ?
15 PsiBlast_PDB 65.8245% -16 - C1 -4HOX 3.0 ?
9 PsiBlast_PDB 65.8149% -18 - C1 -4AIE 2.6 ?
38 PsiBlast_CBE 65.7544% -19 - C1 -1ZJA 2.6 ?
18 PsiBlast_PDB 65.6145% -19 - C1 -4HOZ 4.0 ?
67 PsiBlast_CBE 65.3843% -21 - C1 -4H8U 4.5 ?
65 PsiBlast_CBE 64.9443% -22 - C1 -4HA1 3.9 ?
109 HHSearch 64.0143% 11 - C1 -4HPH 4.2 ?
10 PsiBlast_PDB 63.3948% -12 - C1 -2ZIC 3.5 DEXB_STRMU
111 HHSearch 63.2643% 8 - C1 -1ZJA 2.6 ?
13 PsiBlast_PDB 63.2647% -12 - C1 -2ZID 5.1 DEXB_STRMU
11 PsiBlast_PDB 62.8447% -13 - C1 -4WLC 4.6 DEXB_STRMU
73 PsiBlast_CBE 56.9342% 45 - C1 -3AXI 3.7 MALX3_YEAST
74 PsiBlast_CBE 55.6842% 46 - C1 -3AXH 2.3 MALX3_YEAST
71 PsiBlast_CBE 55.1742% 45 - C1 -3A4A 4.0 MALX3_YEAST
78 PsiBlast_CBE 53.6634% -5 - C1 -3WY1 2.7 ?
76 PsiBlast_CBE 53.5234% -3 - C1 -3WY2 3.7 ?
77 PsiBlast_CBE 53.2434% -5 - C1 -3WY1 3.0 ?
75 PsiBlast_CBE 52.9834% -5 * C1 *3WY2 3.2 ?
118 HHSearch 52.8436% -6 - C1 -3WY2 3.7 ?
80 PsiBlast_CBE 51.2933% -5 - C1 -3WY3 3.9 ?
79 PsiBlast_CBE 51.0933% -7 - C1 -3WY4 3.7 ?
81 PsiBlast_CBE 50.9233% -4 - C1 -3WY3 4.0 ?