@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu35920: (2016-07-30 )
MRNICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVLAEGDNSIVVVKGANDDITPAYALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPARPLKQETIDHATYLTPNEHEASILFPELTISEALALYPAKLFITEGKQGVRYSAGSKEVLIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEELLS

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_9(4XDA)
?
[Raw transfer]




ADP_B_9(4XCK)
?
[Raw transfer]




RIB_A_5(4XDA)
?
[Raw transfer]




RIB_D_15(1GQT)
RBSK_ECOLI
[Raw transfer]




RIB_A_5(4XCK)
?
[Raw transfer]




RIB_A_3(3GO7)
?
[Raw transfer]




RIB_C_3(1RKS)
RBSK_ECOLI
[Raw transfer]




GOL_A_2(3RY7)
?
[Raw transfer]




GOL_A_2(3RY7)
?
[Raw transfer]




ACP_A_6(1GQT)
RBSK_ECOLI
[Raw transfer]




RIB_A_3(3GO6)
?
[Raw transfer]




RIB_A_3(3GO6)
?
[Raw transfer]




ACP_C_12(1GQT)
RBSK_ECOLI
[Raw transfer]




ADP_B_5(3GO6)
?
[Raw transfer]




RIB_A_3(3GO6)
?
[Raw transfer]




ADP_A_7(2FV7)
RBSK_HUMAN
[Raw transfer]




ACP_B_9(1GQT)
RBSK_ECOLI
[Raw transfer]




ADP_D_14(4XCK)
?
[Raw transfer]




ADP_A_17(1RK2)
RBSK_ECOLI
[Raw transfer]




ATP_A_5(3IKH)
?
[Raw transfer]




ADP_C_12(4XCK)
?
[Raw transfer]




ADP_C_19(1RK2)
RBSK_ECOLI
[Raw transfer]




ADP_D_15(4XDA)
?
[Raw transfer]




ADP_C_12(4XDA)
?
[Raw transfer]




ADP_B_18(1RK2)
RBSK_ECOLI
[Raw transfer]




ADP_I_9(1RKD)
RBSK_ECOLI
[Raw transfer]




ADP_I_9(1RKD)
RBSK_ECOLI
[Raw transfer]




ADP_D_20(1RK2)
RBSK_ECOLI
[Raw transfer]




ADP_A_6(4XDA)
?
[Raw transfer]




24 PsiBlast_CBE 79.5037% -35 - C1 -4XCK 5.6 ?
26 PsiBlast_CBE 79.1537% -37 - C1 -4XCK 4.4 ?
59 HHSearch 78.8438% -36 - C1 -4XDA 5.9 ?
25 PsiBlast_CBE 78.7737% -35 - C1 -4XCK 5.2 ?
21 PsiBlast_CBE 78.6737% -35 - C1 -4XDA 5.1 ?
3 PsiBlast_PDB 78.5437% -36 - C1 -4XDA 3.2 ?
22 PsiBlast_CBE 78.2937% -35 - C1 -4XDA 5.0 ?
2 PsiBlast_PDB 77.9637% -35 - C1 -4XCK 3.1 ?
1 PsiBlast_PDB 77.9137% -33 * C1 *4X8F - ? -
23 PsiBlast_CBE 77.8537% -36 - C1 -4XDA 5.4 ?
30 PsiBlast_CBE 75.0036% -35 - C1 -1GQT 3.1 RBSK_ECOLI
31 PsiBlast_CBE 74.4836% -32 - C1 -1GQT 4.7 RBSK_ECOLI
60 HHSearch 74.0936% -33 - C1 -1RKD 5.8 RBSK_ECOLI
7 PsiBlast_PDB 74.0936% -28 - C1 -1RKA - RBSK_ECOLI -
32 PsiBlast_CBE 73.6036% -32 - C1 -1GQT 5.7 RBSK_ECOLI
8 PsiBlast_PDB 73.5736% -32 - C1 -1RKS 3.5 RBSK_ECOLI
62 HHSearch 73.2636% -33 - C1 -2FV7 6.9 RBSK_HUMAN
10 PsiBlast_PDB 73.0836% -31 - C1 -1RKD 5.8 RBSK_ECOLI
28 PsiBlast_CBE 72.9936% -24 - C1 -1RK2 5.5 RBSK_ECOLI
6 PsiBlast_PDB 72.4736% -24 - C1 -1RK2 5.2 RBSK_ECOLI
9 PsiBlast_PDB 72.2736% -30 - C1 -1GQT 5.9 RBSK_ECOLI
29 PsiBlast_CBE 72.2336% -23 - C1 -1RK2 5.9 RBSK_ECOLI
27 PsiBlast_CBE 72.1336% -24 - C1 -1RK2 5.0 RBSK_ECOLI
64 HHSearch 71.9438% -20 - C1 -3GO6 3.8 ?
52 Fugue 70.3137% -21 - C1 -3GO6 3.8 ?
35 PsiBlast_CBE 68.5537% -40 - C1 -3GO6 4.8 ?
12 PsiBlast_PDB 66.3537% -33 - C1 -3GO6 3.7 ?
13 PsiBlast_PDB 65.9437% -34 - C1 -3GO7 3.9 ?
61 HHSearch 63.1733% 21 - C1 -3RY7 3.6 ?
5 PsiBlast_PDB 62.0533% 21 - C1 -3RY7 3.6 ?