@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0103c: (2016-04-19 )
MAAPVVGDADLQSVRRIRLDVLGMSCAACASRVETKLNKIPGVRASVNFATRVATIDAVGMAADELCGVVEKAGYHAAPHTETTVLDKRTKDPDGAHARRLLRRLLVAAVLFVPLADLSTLFAIVPSARVPGWGYILTALAAPVVTWAAWPFHSVALRNARHRTTSMETLISVGIVAATAWSLSSVFGDQPPREGSGIWRAILNSDSIYLEVAAGVTVFVLAGRYFEARAKSKAGSALRALAELGAKNVAVLLPDGAELVIPASELKKRQRFVTRPGETIAADGVVVDGSAAIDMSAMTGEAKPVRAYPAASVVGGTVVMDGRLVIEATAVGADTQFAAMVRLVEQAQTQKARAQRLADHIAGVFVPVVFVIAGLAGAAWLVSGAGADRAFSVTLGVLVIACPCALGLATPTAMMVASGRGAQLGIFIKGYRALETIRSIDTVVFDKTGTLTVGQLAVSTVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAASPDPGPVNGFVAVAGCGVSGEVGGHHVEVGKPSWITRTTPCHDAALVSARLDGESRGETVVFVSVDGVVRAALTIADTLKDSAAAAVAALRSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLREEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLARATMRTIRMNMIWAFGYNVAAIPIAAAGLLNPLIAGAAMAFSSFFVVSNSLRLRNFGAQ

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_B_5(3A1C)
?
[Raw transfer]



ATP_B_4(2YJ5)
?
[Raw transfer]



ACP_A_3(3A1E)
COPA_ARCFU
[Raw transfer]



ACP_B_5(3A1E)

[Raw transfer]



ADP_A_3(3A1D)
?
[Raw transfer]



ATP_B_5(2YJ4)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



ADP_B_5(3A1D)
?
[Raw transfer]



ACP_A_3(3A1C)
?
[Raw transfer]



GOL_A_5(2YJ3)
?
[Raw transfer]



A99_A_3(2YJ6)
?
[Raw transfer]



MGF_A_3(4BEV)
?
[Raw transfer]
56 HHSearch 89.1538% -97 - C2 -3J09 - COPA_ARCFU -
1 PsiBlast_PDB 87.8137% -97 - C2 -3J09 - COPA_ARCFU -
77 Fugue 87.6538%-110 - C2 -3RFU - ? -
21 PsiBlast_CBE 86.1537%-111 - C2 -3RFU - ? -
2 PsiBlast_PDB 86.0237%-111 - C2 -3RFU - ? -
23 PsiBlast_CBE 85.8437%-111 - C2 -3RFU - ? -
22 PsiBlast_CBE 85.7537%-111 - C2 -3RFU - ? -
4 PsiBlast_PDB 85.6537%-112 - C2 -4BYG - ? -
3 PsiBlast_PDB 85.4737%-111 - C2 -4BEV 2.4 ?
59 HHSearch 80.3339% -99 - C2 -3J08 - COPA_ARCFU -
78 Fugue 80.2332%-102 - C2 -4UMW - ? -
5 PsiBlast_PDB 79.0538% -98 - C2 -3J08 - COPA_ARCFU -
58 HHSearch 78.2331%-107 - C2 -4UMW - ? -
7 PsiBlast_PDB 77.8830%-105 - C2 -4UMW - ? -
6 PsiBlast_PDB 73.6630% -97 - C2 -4UMV - ? -
60 HHSearch 67.6422% -86 - C2 -2ZXE - ? -
80 Fugue 65.6919% -81 - C2 -3B8E - AT1A1_PIG -
63 HHSearch 58.5226% -80 - C2 -3B8C - PMA2_ARATH -
9 PsiBlast_PDB 58.3937% -90 - C2 -3SKY - -
8 PsiBlast_PDB 57.9736% -93 - C2 -3SKX - -
65 HHSearch 57.5439% -85 - C2 -3A1C 5.6 ?
24 PsiBlast_CBE 57.3138% -89 - C2 -3A1D 6.0 ?
12 PsiBlast_PDB 56.9238% -88 - C2 -3A1E 5.2 COPA_ARCFU
11 PsiBlast_PDB 56.8138% -88 - C2 -3A1D 4.6 ?
10 PsiBlast_PDB 56.7938% -86 - C2 -3A1C 5.6 ?
25 PsiBlast_CBE 56.4738% -89 - C2 -3A1C 5.8 ?
26 PsiBlast_CBE 56.0238% -88 - C2 -3A1E 5.5
30 PsiBlast_CBE 49.9031% -80 - C2 -2YJ4 6.3 ?
15 PsiBlast_PDB 49.1531% -85 - C2 -2YJ3 2.5 ?
18 PsiBlast_PDB 48.9731% -83 - C2 -2YJ6 5.1 ?
29 PsiBlast_CBE 48.3731% -80 - C2 -2YJ5 5.7 ?